Phaeodactylum tricornutum: PHATRDRAFT_43639
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Entry
PHATRDRAFT_43639 CDS
T01075
Name
(RefSeq) hypothetical protein
KO
K15174
RNA polymerase II-associated factor 1
Organism
pti
Phaeodactylum tricornutum
Brite
KEGG Orthology (KO) [BR:
pti00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pti03021
]
PHATRDRAFT_43639
Transcription machinery [BR:
pti03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
PHATRDRAFT_43639
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Paf1
Motif
Other DBs
NCBI-GeneID:
7197353
NCBI-ProteinID:
XP_002177746
JGI:
43639
UniProt:
B7FSY7
LinkDB
All DBs
Position
2:1069209..>1070961
Genome browser
AA seq
522 aa
AA seq
DB search
MEDDAHRKAEEERRARRKAAKSSKSDAQLEKERKRKEHSQKILQRQSGDAKRQKTTKATV
TFSKLLEQRTQGFQIEFAFRNAPPRPPVGPCFVGRTLDAIMLEESRVYKARNAVEVSHKW
KLHAEVDLGVPIAPSAMDVKSYSTVIRDNAPTPALHEDDMALLDWKGNLGDSAAEQLKLR
QDRARAEARALLAGKSVQKSGASSSASHQQKHSKRAFSRVLDDPLQTWMKKTTYLSNDYS
RKVHDFKSLAQTKQDLAVDLQFKQVELAKRRSNLAITQSFETIKNPLLHPTRKNLKPKAI
CSVLPHADQWGKAFTHLVIDKAPNLLPQYEITALKDAMVTNVEKMEANARMTCQVAVPAK
DPPDELKQHEMTPYHVVQAYDLDVIPLKEEDAPHSNFCFWVDIATSTAYYVPISSRVQLS
TGRPGQSILQSVGRRPVSNQEQIEREERMAEVDQDMAEKHHIVKNAPPKPLAASVNAIVA
PNSSEKRDSDGDGEGDFGDEDDSDSDDEQLFGGGTKTIVAES
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atggaggacgatgctcaccgcaaagcggaagaagagcgtcgtgccaggcgcaaggccgcg
aaatcttcaaagtcagacgctcaactagaaaaggaacgcaaacgaaaagagcacagtcaa
aagatcttacaacggcagagcggagacgcaaaacggcagaagacaaccaaggcaaccgtc
accttttccaaactcttggaacagcggacgcagggttttcagattgaattcgccttccgc
aatgcaccaccccgacctccggtgggcccctgttttgttggtaggactctagatgcaatc
atgttggaggagtctcgtgtttacaaggcacgcaacgctgtcgaagttagccacaaatgg
aaattgcacgcggaagtcgatttgggcgttccaattgcaccgtctgcgatggatgtaaaa
tcttactccaccgtaattcgggacaacgccccaacgccggctttacatgaggatgatatg
gctttgctggactggaagggcaatttgggcgattccgctgcggaacagctcaagcttcgt
caagaccgtgcaagagccgaagcaagagctctgttggcaggaaaatccgttcaaaaatcc
ggagcgtcatcctcggcttcacatcagcaaaagcattccaaaagggctttctctcgtgta
ttggacgatcctttgcagacttggatgaaaaagacaacctatctctccaacgattattca
cgcaaggttcatgatttcaagtccttggcacaaacgaagcaagatttggctgtcgatttg
cagtttaagcaggtagaattggctaagcgccggtccaacctggcaatcacacaatctttt
gagacgatcaaaaatccattgctacatccaacacgcaagaaccttaaacccaaggcaatc
tgcagcgttttgccccatgctgatcaatggggtaaagcgtttacgcatttggttattgac
aaggcgccaaaccttcttccacaatacgaaattaccgcgttaaaagatgcgatggtcact
aatgttgagaagatggaagccaacgcacgcatgacatgccaagtcgcagttccagcaaaa
gatccacccgatgagctgaaacaacatgagatgacaccctaccatgttgttcaggcttac
gatttggatgttattccattgaaagaagaggatgcgcctcactccaatttttgcttttgg
gttgacatcgcgacaagtactgcgtattatgtacccatatcttcgcgtgtccagctctcg
acgggccgaccagggcaatcgattttacagtcggtaggtcgacggccggtcagcaatcag
gagcaaattgagcgagaagaacgtatggcagaggtcgatcaagatatggcggagaagcat
catattgtaaagaacgcccccccgaagccactggcggcttctgtgaacgccattgtggca
ccaaattcctccgagaaaagagattccgatggcgatggcgagggcgattttggcgatgaa
gatgattcggattcagatgatgaacaactcttcggtggtgggactaagactattgttgca
gaaagctag
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