Phaeodactylum tricornutum: PHATRDRAFT_44333
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Entry
PHATRDRAFT_44333 CDS
T01075
Symbol
Pt-Spc98
Name
(RefSeq) Spc98
KO
K16570
gamma-tubulin complex component 3
Organism
pti
Phaeodactylum tricornutum
Brite
KEGG Orthology (KO) [BR:
pti00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pti03036
]
PHATRDRAFT_44333 (Pt-Spc98)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pti04812
]
PHATRDRAFT_44333 (Pt-Spc98)
04147 Exosome [BR:
pti04147
]
PHATRDRAFT_44333 (Pt-Spc98)
Chromosome and associated proteins [BR:
pti03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
gamma-tubulin ring complex
PHATRDRAFT_44333 (Pt-Spc98)
Cytoskeleton proteins [BR:
pti04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Gamma-tubulin complex components
PHATRDRAFT_44333 (Pt-Spc98)
Exosome [BR:
pti04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
PHATRDRAFT_44333 (Pt-Spc98)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GCP_C_terminal
GCP_N_terminal
PDCD7
Motif
Other DBs
NCBI-GeneID:
7198028
NCBI-ProteinID:
XP_002178462
JGI:
44333
UniProt:
B7FTR3
LinkDB
All DBs
Position
4:complement(258074..260701)
Genome browser
AA seq
843 aa
AA seq
DB search
MPKLSDHDIENALFRLVRSTVGPDADSLSLARHINRTGKQTWTSATNGQANLKALLQDIV
QELPDKESQRKLKALLDRLETLYDGAASNAPASFVKVLTELAESNGQRPVMPLHHPTITK
TEVNENDKRRSRSFEEAFLEAFNVEEQYVLRECLYALQGINGERIRFVWKYKINVSLRED
TYEGIRVRSEAIDQHQALPPSLLVHSKLGSGSKDAIRMCCEAGWLYSRIADYLSKVQSIE
QGAVLRAFASSLTEEMHSYQCFLARLEESHPYSIRQMLLELRPPISRLRILATLVDGLVH
ISGGPLLTALYLHMRHGDSRHGTLLKQILHQSSRPWFQMLSLWTTQGLLMDPFEEFFVEE
NEGVADHNLWSEGYSIKEQKVPIGVVDEGLVLVAFSIGKGINFIRKSLQDGEWRLKIEDK
SAISESMLKEPRSSFFVEDSSISRKNLDSAALQVHSHILTSLHDRHHLLQHLFALKQFLL
LGQGDFYSSLLDGIHQEFEGRRGIVGVYRHTLAAIVDSALRGTNASDFPEFVLKRLQVEL
RLSADEDARYMFGCSKESDADVRTVWDIFLLEYSVPDPLVAIVHAKAVESYRKLFLFLFN
LRRVEFMLNLTWRHSAVLQHALQTAAQHNGINVSISKAYAQATVLLRQIAITRQSMMHFV
VNLKSYLMFEVLEGGWKQLVHGIEESKTLDQVIATHDDYLSCLLRKGLLDGARGGSSEGP
DVAKQFEQLFYLSDEFCAYQQEMFGEAQESADRAAVKRREAEERLNHGHWGFSTEKEVSE
EETFFGLADATKLFEADRISASFDEQIVLLLQALDQKLNGVPLEKPLNMKTPPAQRLDRN
LSF
NT seq
2532 nt
NT seq
+upstream
nt +downstream
nt
atgccaaagctgagcgatcacgacatcgaaaacgctctgtttaggctggtccgctccacc
gtcggtccggatgccgacagcctgtcgttggcgagacatatcaaccgcaccggtaaacag
acttggacaagtgccactaacggccaagctaacctgaaagcgttgctgcaagatatcgtc
caggagcttcccgataaagagtctcaacgaaaattgaaggcgttgctggatcgactagaa
acgctatacgatggagccgcctccaatgcgccggccagctttgtgaaagtgttgactgaa
ctggccgaaagcaacggacaacgaccagtgatgcctctacatcatccaacaatcacaaaa
accgaagtcaatgaaaatgacaaacgaaggagtcgatcatttgaagaagcttttttggaa
gcatttaatgttgaagaacaatatgttttgcgggaatgtctttacgctcttcaggggatc
aatggggaaaggatacgctttgtatggaaatataagataaatgtgtctctccgggaagat
acctacgaaggaattagggtacgatctgaagccatcgatcagcatcaagcgctgccgcca
agcttactagttcattcaaaattaggatcaggttctaaggatgcgattagaatgtgctgc
gaagccggttggttgtacagccgtatagcggactatctaagcaaagtgcaatcaatcgaa
cagggagccgttcttcgggcctttgcgagttctttgacggaagaaatgcactcctaccaa
tgctttctagctaggctagaagaatcgcatccatattccatccgccagatgcttctggaa
cttcggccaccaatttccaggctacgaatcttagccacgctggtggatggtcttgtgcat
atttcggggggtccgcttttgactgccttatatcttcacatgcgccacggtgattcgaga
catgggactttgctaaagcagatattgcaccaatcgtctaggccttggtttcaaatgctt
tcgctttggacaacccaaggcctcttgatggatccgttcgaagaattttttgtggaagaa
aacgaaggagttgcggaccataatttgtggagtgaaggatactctattaaagagcaaaaa
gtgccgataggggtcgtagacgagggtctcgtattggttgcctttagcatcggaaagggg
attaacttcattcggaagtctttacaagatggtgaatggagattgaaaattgaggataaa
agtgccatttccgaatcaatgttgaaggaaccgcggtcgtcgtttttcgtggaggatagc
tcgatctctcgtaaaaatttggacagcgctgctttgcaggttcattctcatattctcaca
tcgctacacgacaggcaccatttgttgcagcatctttttgcactcaagcaatttcttctt
ttgggacaaggtgatttttattcttcccttctagatggtattcatcaagagtttgaaggg
cggcggggaattgtaggggtttatcgccatactctagctgctatagttgattccgcctta
cgaggcacaaacgcttctgattttcctgaattcgtactgaaacgactgcaagtagagctt
cgattatctgccgatgaggatgcaaggtatatgtttggttgctcgaaggaaagcgatgct
gacgtgagaacggtttgggatatttttttgttggaatacagtgtccctgatccattggtt
gcaattgttcacgcaaaggcggtggaaagctatcgaaaattgttcctatttctttttaat
cttcgtcgagttgagtttatgctcaatctcacttggcggcacagtgcagttctgcagcac
gcgttgcagacggccgcacagcacaatggcattaacgtttcaataagcaaagcctatgct
caagcaacagttcttctgcgccaaattgctattacgaggcaatccatgatgcatttcgta
gtaaatctcaagagctatttgatgtttgaagtattggaaggcggctggaagcagctcgtc
cacggtatcgaagaatcgaaaactctggatcaggtcattgctacacacgatgactacctt
tcgtgtttactgagaaaaggtctgctggatggggctcgtggaggtagcagcgaggggccc
gatgttgcgaagcaatttgagcaactcttttatctctcagacgaattttgtgcctatcag
caagaaatgtttggagaggcacaggaatctgctgatcgagctgccgtcaagcgcagagaa
gccgaagagagactcaatcatgggcactggggattcagtacggaaaaggaagtctccgaa
gaggagacattttttggtctggcggatgcaaccaagttgttcgaggccgacagaatttct
gcatcattcgacgaacaaattgtcctacttcttcaggcgctcgatcagaagttaaacgga
gttcccttagaaaaacctttgaacatgaagacacctcctgcgcaacgtctggatcgcaat
ttaagtttttga
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