Phaeodactylum tricornutum: PHATRDRAFT_44342
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Entry
PHATRDRAFT_44342 CDS
T01075
Name
(RefSeq) hypothetical protein
KO
K10295
F-box protein 9
Organism
pti
Phaeodactylum tricornutum
Brite
KEGG Orthology (KO) [BR:
pti00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pti04121
]
PHATRDRAFT_44342
Ubiquitin system [BR:
pti04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
PHATRDRAFT_44342
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Gene cluster
GFIT
Motif
Pfam:
FBO_C
F-box-like
F-box
Motif
Other DBs
NCBI-GeneID:
7197821
NCBI-ProteinID:
XP_002178467
JGI:
44342
UniProt:
B7FTS1
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Position
4:complement(274711..276199)
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AA seq
381 aa
AA seq
DB search
MSATEALVPAVITAHTDGSAEESNELWFREEERWELTWPIWHMLPRHERKALAQQHGYST
IGEFEEFMTLQRAVGDSNDTPRSRPDENNLIPSSERSSQGKKKIRGRTEDKDADGNSSSD
EKLEKKIECELASAAGHLSIEELLDVGGQILMIPDDILHKVFEWLPVDAYGTLSLVSPHW
KAFTRTEAVYKRLCERLYLNQSKRRALHVSRFGNSYRAMLELRPRVRAGGGIYVLKFARV
KKIQRDMWTEIPVGAVLETVYYRYLYFQEDGRVLYALTAASPHEMFRRFLKVCLTRQPDK
AAVWGTYEVSKSTVTINARQAWQYVRLEVSIQPESVHGRNGLLRFDRHMASSIGDFDDWS
RDRTVFEVPSEPFRFVKDRRL
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcgacagaagcgttagttcctgcagtaatcactgcgcacaccgatgggagtgct
gaagaatcaaatgagctatggtttcgtgaagaagaaaggtgggagctcacttggccaatt
tggcatatgcttccaaggcatgaacggaaggcgcttgctcagcaacatggttacagtacg
atcggtgaattcgaagaattcatgacgcttcagcgagccgtcggagactcgaatgatact
ccaaggtcgcgacctgatgagaacaatttgataccttcgtcggaaaggtctagccaaggc
aagaaaaaaatcaggggtcggactgaagacaaggacgccgatggcaactcatcaagcgac
gaaaagcttgaaaagaagattgaatgtgagctagcgtcggctgctggacatctttcaatt
gaggagctgttggacgtcggcggtcagattttgatgattccagatgacatactgcacaaa
gtcttcgagtggttgcccgttgacgcttatgggacactgtcattagttagcccccactgg
aaagcgtttacaagaacggaggcagtgtacaaacgtctatgtgagcgtctttatttgaat
caaagcaaaagaagagctttacatgtcagccggtttggtaattcataccgagcaatgtta
gaattgagaccccgggtgagggctggcgggggcatctacgttttgaaatttgctcgtgta
aaaaagattcaacgtgacatgtggacggagattcctgtcggagctgttctagaaactgtg
tattaccgttatctgtattttcaggaagacggacgggttctatatgcgttgacggcggct
tcgccacacgaaatgttccgaagattcttaaaagtttgtctaacacgtcaaccagataaa
gccgctgtctgggggacctacgaagtctccaaatcaacggttacaatcaatgctcgacag
gcgtggcaatacgttagactggaagttagtatccagcccgaaagcgttcacggccgaaat
ggtctcttgcgattcgatcggcatatggcgagctcgatcggcgatttcgacgactggtct
cgcgatcgcacggtctttgaagtgcctagcgaacccttccgttttgtaaaagatcgtcgt
ctatag
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