Phaeodactylum tricornutum: PHATRDRAFT_44360
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Entry
PHATRDRAFT_44360 CDS
T01075
Name
(RefSeq) hypothetical protein
KO
K18726
FAS-associated factor 2
Organism
pti
Phaeodactylum tricornutum
Brite
KEGG Orthology (KO) [BR:
pti00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pti03019
]
PHATRDRAFT_44360
Messenger RNA biogenesis [BR:
pti03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
PHATRDRAFT_44360
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBX
Thioredoxin_7
MAML1_3_TAD2
Motif
Other DBs
NCBI-GeneID:
7197837
NCBI-ProteinID:
XP_002178210
JGI:
44360
UniProt:
B7FTU9
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Position
4:330376..331691
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AA seq
415 aa
AA seq
DB search
MVSQREEAGHWCTARGTLWSVIAFLPFAVGTVFLSHSCTRQLPFSRQSNTRQTLTQRCLN
MLAIVLRLLLYPLRWLIAWIFAGTDEFDGLSDAVTAKAAQQFVTYLQTMAKQNTTGVPGN
NRTLADAWVSTGFQAAKEQALATHSLVLVYLHSPLHRESDRFCRDVLCHPLMRRFLSQPH
VLALGVSIHTAQGAHLATTLQATAYPLLALLQPQSATALHMLLRAEGAAVTRMSAESLSP
YLQVAWQRQQHMAAELETRRLLREQEQELRRQQDEEYQQTLLADQERERIRREEQDEILQ
TQREEELRQQREVEQTEQALASAKAQLGPEPESGGAVIRFVLPSGAKLNRRFASDETIAT
LKAFLKVHFHDSNVGIERVALSTNFPRKTYEDDSVTLAEADLTPQAVLMVQDLDA
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atggtgagtcaaagagaagaagcagggcattggtgtacagctcgcggaaccttgtggagc
gtgatcgcctttttaccattcgccgttgggactgtgttcctttctcactcttgtacccgg
caattacctttttcacgtcagtccaatacccgccaaacccttacccaacggtgtttaaat
atgcttgccattgtattgcgcctcctgctgtatcctttgcgttggctgattgcctggatt
tttgccggcacggacgaattcgacggtctttccgatgccgtcaccgccaaggccgcgcag
cagttcgtcacgtatctacaaactatggcgaagcagaacactaccggagtaccgggaaat
aatcgaacgctcgcggacgcgtgggtatcgaccggctttcaagccgccaaggagcaagcc
ttggctactcattcgctcgtcctcgtgtacctgcattccccgctccaccgcgaatcggac
cgattttgtcgggacgtgctgtgccacccattgatgcggcgatttttgtcccaaccgcac
gtactcgccctgggcgtcagtatccacacggcgcagggagcgcacttggcgaccactttg
caggccacggcgtatccgctgttggcgctgctgcaaccgcagtcggccaccgccctgcac
atgctgttgcgcgccgaaggcgcggccgtgacgcgcatgtcggccgaatcgctctcgccc
tatctgcaggtggcttggcaacggcaacagcacatggcggcggaattagaaacacggcgg
ttgctgcgggaacaagaacaggaactgcggcgacagcaggacgaggagtaccaacagaca
ctcttggccgaccaggaacgggagcgaatacgtcgggaagagcaagacgaaatcctacaa
acacaacgagaggaagagttgcggcagcagcgggaagtggaacaaacggagcaggccttg
gcgagtgccaaggcacagcttggccctgaaccagaatcaggaggtgccgtgattcggttt
gtgctgccgagcggagcaaaactaaatcggcgatttgcttccgacgagactattgcaacg
ctcaaagcatttttgaaggtacattttcacgacagcaatgtggggattgagcgggtggca
ctgtcgaccaactttccacggaaaacgtacgaagacgatagtgttacgttagcagaggca
gaccttacaccccaagcggttctaatggtccaagatttggatgcgtaa
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