Phaeodactylum tricornutum: PHATRDRAFT_44502
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Entry
PHATRDRAFT_44502 CDS
T01075
Name
(RefSeq) hypothetical protein
KO
K13103
tuftelin-interacting protein 11
Organism
pti
Phaeodactylum tricornutum
Brite
KEGG Orthology (KO) [BR:
pti00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pti03041
]
PHATRDRAFT_44502
Spliceosome [BR:
pti03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
PHATRDRAFT_44502
Other components
Complex C specific factors
PHATRDRAFT_44502
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GCFC
TIP_N
G-patch
G-patch_2
Not1
Motif
Other DBs
NCBI-GeneID:
7197772
NCBI-ProteinID:
XP_002178295
JGI:
44502
UniProt:
B7FUC1
LinkDB
All DBs
Position
4:749256..752231
Genome browser
AA seq
991 aa
AA seq
DB search
MSDSEEGLHDASSDDGMEKLPKLYRASWNSGSEMDDEPTTRRRRTKDEATYGIFMDDSGD
DEKGARGHKSRKRSNREQSHKKTINCEHGPPMFISGKSEDPAPFPPTVSNETQTKTVLKS
QKGTTEMGSETLAFIQTAEEQKLQAQREAADQEFQKLLLLARAKKGITRLQHRIDSEVPA
AGLETSERDPNTFFTGDDRPTGLGFGKRERVSKPPPKRDPNLGAWEKHTKGIGMKLLSKM
GYSGSGGLGSKKRKRDSSLSRPVEVKVRPANLGLGFGGFKEATKLKSIRKTEVEANGVEF
SENMGTVRLDMHSSSIPSNAQTSLLPSTNDLLKEQSWRKVGRGATKNKFKQKTVPYEDIL
KKINTGPAVILDLRGPGAAKTTDSGLPKDLQLADELLYNMTLLRNTYENKLYSSLYFVNS
TKRKLESLQSDIQSIDERRILANDRADKLIRLVDLLKEMQILFEDGIDRNESQIQGLILE
IDAIFTVEEKESLQILNLILPSLVGDLVSSKMEHWHPLREETKSAANLIRSLLSISGLAN
SNSTHLQSENTALQKIVLINYIIPRVQKSFQSPQWDPARDTEIALRFYETFQSILMDTFI
IEDQENYNKPGKGSDDQVFPMIHVDKGAAVIDLIRDKLIYDSVYPKLMRSINAWKPLLHD
DRLANPLDRFVLPWVPLLDHRSLLPTLVSDCKKKLRNGLSFMQKQLSDDLQFTKASMELL
SPWTGVLKVESLQSMVSHLVAPRLGSYIRNSTIERGPDRPSNLALKVVNKLNCTGLLANL
ESLTLVEELLVRWSQSMHQWLEGASHTERQDLIKTYLVWRNGILFPVPSDGKNIFDASCY
LFRRDETLCRIFFSIASMFKTAKDERFAEFYPPAVNYRTALARRVVEDRRKAADDLTRLE
NTGDISIDTRVRLNRKGLVPTFRDVVEQYATERGILFQPRLGHGSKKDGKQVFLFGDAPI
YMDANVIYVFASGDWRPISLGDLEAKITGSA
NT seq
2976 nt
NT seq
+upstream
nt +downstream
nt
atgtccgactcagaggaaggcctgcatgatgcttcgtcagacgacggaatggaaaaacta
ccaaaattgtatcgcgcaagttggaacagtggtagcgagatggatgatgagcctacaact
cgccgtcgtcgcactaaggatgaagcaacgtacggaatattcatggacgacagcggtgac
gacgagaaaggagctcgtggtcacaaaagtcgcaaacgttccaatcgggaacaaagtcac
aaaaaaacgatcaactgtgagcatggaccgccaatgttcatttccggcaagtccgaagat
ccagcaccttttccgccaaccgtctcgaacgaaacgcagacaaaaactgttttgaaatct
caaaaaggaactaccgaaatggggtctgaaacactcgctttcattcaaacggccgaagag
caaaagctacaggcgcagcgagaagctgcagatcaagaatttcaaaagttgcttctactt
gctcgagcgaaaaaggggataacgcgactacaacatcgaatagattcagaagtgccggct
gctggactagaaacttccgagcgtgacccaaacactttctttaccggagatgatagaccc
acggggttgggttttgggaaaagagaacgagtgtcgaagccaccgccgaaacgcgatccg
aacttgggtgcttgggaaaagcatactaaagggattgggatgaagctactttccaaaatg
ggctactcaggtagcggaggactgggatcaaagaagcgcaaacgagatagtagcctatcg
cgtcctgtcgaagtcaaagtgcgaccagcaaatttgggtctgggctttggtggattcaag
gaagcaacaaaattgaaaagtattcggaaaaccgaagttgaggctaatggggtggagttt
tctgagaatatgggcactgtccgccttgatatgcattcttcgtcaattccatcaaatgca
caaaccagcttattgccgagcactaacgatctactcaaggagcaatcttggaggaaggtt
ggacgcggagctacaaagaacaagttcaaacaaaaaactgtcccatatgaagatattcta
aagaaaatcaacactggacctgcagtcattcttgatctgagaggtcctggcgccgccaaa
acgacagattctgggctacccaaggatttgcaactagctgacgagctactatacaacatg
acgcttttacgcaatacctatgaaaacaaactatactcgtctttgtattttgtcaactca
acaaagcgaaagctggaaagtttgcagtctgacattcaaagtatcgatgaacgccggatt
ttggcaaacgaccgcgctgataagcttattcggctagtggacctgctgaaggagatgcag
attttgttcgaagacggaatcgacagaaatgaatctcaaatacaaggtttgatactagaa
attgacgcgatttttacagtggaagagaaagaatctcttcagattttaaaccttatcttg
ccatcgctcgttggtgatcttgtatcatcaaagatggagcattggcatcctttaagagag
gagacaaagtcggcagctaacctgattcgctccttgttgtctattagcggcctcgccaat
tcaaacagcactcatttacagtcagagaatacggcattacagaaaattgtactgataaac
tacatcattcctcgagtacaaaaatcattccagtctcctcaatgggatcccgccagagat
accgagattgcgcttcgtttttatgaaacgtttcaaagcatactgatggatacatttatc
attgaagatcaagaaaactacaacaagccaggcaagggatcggatgatcaagttttccct
atgatacacgttgataagggcgcagctgtgatagatctcatccgcgacaaacttatctac
gattcggtttatcccaagctcatgcgctcaatcaacgcgtggaaaccattattgcacgac
gatagacttgccaatcccctcgatcgttttgtgctgccgtgggttcctctcttagaccat
cgctcactattacctaccctcgtttctgactgcaaaaagaaacttcgaaatggattgtct
tttatgcagaagcaactctctgacgatctccagttcaccaaagcttctatggaattactc
agcccgtggactggagtacttaaagtggaaagcctgcaaagtatggtctcgcacttggtt
gccccacggttgggaagctatattcgcaactctaccatcgaacggggcccagaccggcca
tccaaccttgctctcaaagttgtgaacaagctcaattgcactggccttctcgctaatctt
gaaagtctcactttggttgaagagttattggtccgttggagtcagagcatgcatcagtgg
ctcgaaggtgcttcgcacacagaaaggcaagatttgataaaaacatatctggtttggagg
aacggaattttatttcctgtaccgtcagatggaaaaaatatttttgatgcatcctgctat
ttattcaggcgagacgaaacactttgccgtatttttttctcgatagcttcgatgttcaaa
accgctaaagatgaacgattcgctgagttctatccgcctgctgtgaactatcgtacagct
ctcgcccgccgcgtagtcgaagacaggcgcaaggcagccgacgacttgacccgattggag
aatactggcgatatcagcatcgacacacgggttcgattaaaccgcaagggtcttgtacct
acctttcgcgatgttgttgagcagtatgccacggagcgtggtatactatttcaacctcga
ttgggacacggctcgaaaaaagacggaaaacaagttttcttgttcggggacgcacctata
tacatggacgccaatgttatttacgtctttgccagtggagattggagaccgatttcgctc
ggtgacttggaagcaaaaatcacagggtcggcatga
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