Phaeodactylum tricornutum: PHATRDRAFT_44534
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Entry
PHATRDRAFT_44534 CDS
T01075
Name
(RefSeq) hypothetical protein
KO
K12190
ESCRT-II complex subunit VPS36
Organism
pti
Phaeodactylum tricornutum
Pathway
pti04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pti00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
PHATRDRAFT_44534
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pti04131
]
PHATRDRAFT_44534
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pti04147
]
PHATRDRAFT_44534
Membrane trafficking [BR:
pti04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
PHATRDRAFT_44534
Exosome [BR:
pti04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
PHATRDRAFT_44534
Exosomal proteins of colorectal cancer cells
PHATRDRAFT_44534
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAP30
Vps36_ESCRT-II
NRIP1_repr_1
Motif
Other DBs
NCBI-GeneID:
7198067
NCBI-ProteinID:
XP_002178313
JGI:
44534
UniProt:
B7FUF4
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All DBs
Position
4:829471..830881
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AA seq
417 aa
AA seq
DB search
MNETYSPFECLPVADLTSAGLLQKQDDIEVELIARENDCELRSGVDDPMVAIGANGQAVS
THGKAWVDRKMGLTVTITTHRIVLMQQTSDKRVNARYIHLSHVLAAVTENQLFKSPKIIL
DSYSGEFLLVFKGKEANKDRDAVLYHIQKALSRQDWETADRAAQHRKAVANLTSRKVGVD
AVLAKHKTRHAQAARLTDSAFDGDAETLLREAHELVAVIHKYVATLDKQKEVSSQDEQDA
TRLADLLQNMGMTSALSKANFLGSEDAYYTQLARQLADFLEPHLHKAGGILTLTDVYCLF
NRARGTNLISPEDLTKAASQMDALSIGMSRRVFPSGLIVIQDDSFDDHAMAEKLQALALD
APQGLTETEASRQCQISALLAHEELLAAERMGILVRDETLESTRFFPNRFEAWADIQ
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaaacatattcgccttttgagtgcttaccagtggctgacttgacttcggctggt
ctactacagaagcaggatgatattgaagtcgagcttattgcccgagaaaacgattgcgaa
ttgcgtagtggagtggacgatcccatggtagcaataggtgccaacggacaagcggtatcc
acacatgggaaggcttgggtggatcgaaagatgggcttgactgtcactatcacaacccac
cggatcgtcctcatgcagcaaacgtcggacaaacgagtcaacgctcgttatatccacctt
tctcacgttctagccgctgtgactgaaaaccaactttttaagagtcctaaaataatattg
gactcctacagcggggagtttcttctcgtgttcaaaggcaaagaggccaataaagatcga
gatgccgtgctctaccacatacaaaaggcgctttcacgtcaagattgggagacagccgac
cgggcagcgcaacaccgaaaggctgtagcaaatttgacttcccgcaaggtaggcgtcgac
gcggttctcgccaagcacaaaactcggcacgctcaagcggctcgtctcacggactccgct
ttcgatggagacgccgaaacgttgctacgggaagcccatgaactcgtcgctgtcattcac
aaatacgtggcaacgctcgataagcaaaaagaagtttcctcacaagacgaacaggatgca
acccgtttggcagatttgctgcaaaacatgggaatgacgtcggccctgtccaaagcgaac
tttctaggctcggaagatgcatactatacgcaattggcccgacagctggccgacttttta
gaaccccatttacacaaggctggtggtatactaacactgacggatgtgtactgcttgttt
aatcgtgcgcgtggcacaaacctgatttcgcccgaagacttgaccaaggcagcgtctcag
atggacgcattgtccatcgggatgtctcgacgggtttttccaagtggactaattgttatt
caggatgactcctttgacgatcacgctatggcagagaaactgcaagctttggctttggac
gccccacagggtttgacggaaacggaagcctcacgacagtgtcaaatctcagccttgctg
gctcacgaagaactactggcggctgaacgcatgggcattttggtgcgggacgaaacattg
gagtcgacgcgattctttcctaaccgatttgaagcttgggcagacatacaatag
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