Phaeodactylum tricornutum: PHATRDRAFT_45009
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Entry
PHATRDRAFT_45009 CDS
T01075
Name
(RefSeq) hypothetical protein
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
pti
Phaeodactylum tricornutum
Pathway
pti03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pti00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
PHATRDRAFT_45009
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pti03021
]
PHATRDRAFT_45009
03036 Chromosome and associated proteins [BR:
pti03036
]
PHATRDRAFT_45009
Transcription machinery [BR:
pti03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
PHATRDRAFT_45009
Coactivators
SAGA/TFTC/STAGA complex
PHATRDRAFT_45009
Chromosome and associated proteins [BR:
pti03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
PHATRDRAFT_45009
STAGA complex
PHATRDRAFT_45009
TFTC complex
PHATRDRAFT_45009
SAGA complex
PHATRDRAFT_45009
SLIK complex
PHATRDRAFT_45009
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF6_C
TAN
Motif
Other DBs
NCBI-GeneID:
7199678
NCBI-ProteinID:
XP_002179103
JGI:
45009
UniProt:
B7FVA0
LinkDB
All DBs
Position
5:complement(985711..987359)
Genome browser
AA seq
498 aa
AA seq
DB search
MQTTARHTLVTLVEDHLTVLIADAVTVGRHAKRARTVTNSNSNNNTTNGTPLDEVAAVSK
GTSSSTGGGVTVRRRLHAADINLALQMRQSEKLYATALVPPDTVHPSSMSTTTTTDNPDH
SLPASHRPVNLADFLRHAQLPFQQPAEVALHVSWLAVDGIAPEPHPHGVVGAWTDRHTPS
PHPLAMPHENNNHHNPYQSTAPQAWLVQQLQAAMLSEELQLYFTRVTYALDNTTNTHSPT
SARAQDRLLDRLAVDAHLQELVPFFARYVTQTLYASHVTHQRAAVRLVQAMLHNPTLHLE
LYLHELVPALLTAIVADHRDRTNQRTSVAVTATPHWRLRVEASVALRTVCRQFGPEYPTL
QARVLRTLCQALGPDRSRPAVFGGLTAVTLFGPLAIQAFVLPMLPHAWNAWEEEAQSSAT
EEVQWETRQCQQAALGALGTWLRSYAPTAPQTLTAGPAEQVAATDVAHPLLADTWGDALV
PLQGYGPDVPTDYTLCVL
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgcagacaacggcgcgccatacgttggtgacactcgtggaggatcacctgaccgtgttg
attgctgatgccgtcacggtgggacgacacgccaagcgtgcccgaaccgtcaccaacagt
aactccaacaataacaccacgaacgggacacccttggacgaagtcgctgccgtgtccaaa
ggaacatcttccagtacggggggaggagtcacggtacgccgacgtttacacgcggccgac
attaatctcgccttgcaaatgcgacagtcggaaaaactttacgcgacggctctcgtgcca
ccggacacggtacatccgtcgtctatgtcgacaacaaccaccacggacaatcccgaccat
tccttacccgcgtcgcatcgtcccgtcaatctggccgactttttgcgacacgcccaactc
ccattccaacaacccgccgaagtcgccttgcacgtgtcgtggcttgccgtggacggcatt
gctccggaaccgcatccgcacggggttgtcggggcgtggacggaccgacacacgccctca
ccccatcccctcgccatgccacacgaaaacaacaatcaccacaacccataccaatccacc
gctccccaagcctggctcgtacaacaactccaagccgccatgttgtccgaagaactacaa
ctatactttacccgcgtcacctacgctctggataacaccaccaatacccactccccgacc
tccgcacgcgcgcaagatcgactcctggatcgactcgccgtcgacgcgcatttgcaggaa
ctcgtgccctttttcgcacgctacgtcacgcagactctctacgcatcgcacgtgacccac
caacgtgccgccgtacgactcgtgcaagccatgctccacaatccaaccctgcatctcgaa
ctctacttgcacgaactcgtaccagcactcttgaccgccattgtggccgatcaccgcgac
cggacgaaccaacggacctccgtcgccgtgaccgccacgccgcactggcgtttgcgcgtc
gaagcttccgtcgcgctccgcaccgtctgtcgacaattcggacccgaataccccaccctc
caagcacgggtactccggaccctctgtcaagcactcggaccggaccggtcccgaccggcc
gtctttggcggtctcaccgccgtcacactctttggaccactcgccatccaagcctttgtc
ctacccatgctgccgcacgcctggaatgcctgggaggaggaagcacagtcgtccgctacg
gaagaagtgcagtgggagacccgacaatgccaacaagccgcactcggtgccctcgggacg
tggttgcggtcctacgcaccaacggctccgcagacgttaactgctggaccggcagaacaa
gttgccgcgaccgacgtcgcgcatccactcctcgccgacacgtggggagatgccctggta
cccttgcaaggctacggacccgacgtgcccaccgattataccctgtgtgtactctaa
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