Phaeodactylum tricornutum: PHATRDRAFT_45247
Help
Entry
PHATRDRAFT_45247 CDS
T01075
Name
(RefSeq) hypothetical protein
KO
K19619
tyrosyl-DNA phosphodiesterase 2 [EC:3.1.4.-]
Organism
pti
Phaeodactylum tricornutum
Brite
KEGG Orthology (KO) [BR:
pti00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pti03400
]
PHATRDRAFT_45247
DNA repair and recombination proteins [BR:
pti03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
PHATRDRAFT_45247
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-GeneID:
7200116
NCBI-ProteinID:
XP_002179466
JGI:
45247
UniProt:
B7FWZ3
LinkDB
All DBs
Position
6:complement(595112..596744)
Genome browser
AA seq
509 aa
AA seq
DB search
MSGWIRRCRNSSFLVWVSCRSSSSVSAWSSPRWNGDKMTDSRPRKSQRMSVSPAVPDAPA
IDVPPWLIASTGDLHRKRPAAFDQGNVDDDSVDNESLDVRRVILFAEPEEGAASSKAGSK
HGKAIEVRSPFQKSAAEKRAIAEKQQCAKIKAKWGVTLELAIADSLGHLSSPTKIHSPSI
RPSNAPAVVSSTGSSTPRHFSVATYNIWFGLDRDNGHPHGAARMQAMVDELLRCESPDNP
LWFIGLQEVTPGLARTLFPALERVGYVVIHQEDAPYGVALAVKQQDAADGSPCPVVLDFG
WKDFSRTVMQRGFLFVRVRLPGSENSTTAAQCIVTTTHLESYMPATERDPVYTGSEQRHL
QLEQMQEFCHKEMARHRAVQTVILTGDMNWDDERKTPFDKPLLGYLPSTQNWKDAWLTSQ
LAKDKGYTYDGKLNPMLGSNLRRRFDRCLVHTNAVEDAATEIISTLMIGKLAIPNLTWQK
YNSWKQTYKETPTAPSDHFGLVTQLRYHA
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgagtggctggatacgacgttgccggaattcctcctttcttgtctgggtatcctgtcgt
tcctcgtctagcgtttccgcttggtcttctccgcgttggaacggtgacaagatgacggac
tcacgtccccgcaaaagccagcgcatgtcggtttccccggcggtccccgatgcgcctgcg
atcgatgtcccgccgtggttgatcgcttccaccggagacctgcaccggaaacgacccgcg
gctttcgatcaaggtaatgtggatgacgacagcgttgacaacgaatcgctcgacgtccgt
cgcgttattctctttgccgaaccagaggaaggagcggcttcgtccaaagccggatccaag
catggcaaagccattgaagtccgatcccccttccagaaatctgctgcggaaaaacgagct
atcgcagagaagcagcagtgcgccaaaataaaggccaaatggggcgtcacccttgagttg
gcgatcgcggattcgctaggacatctgtcgtcaccgacaaagatacacagccccagtatt
cgtccgtccaatgctccggcagtagtctcgtctacgggttcatccacgccccgtcacttt
tccgtagccacctacaatatttggttcggtctggatcgagacaatggacacccccatggg
gctgcgcggatgcaagccatggtcgacgaactactgcgctgcgaatcgcccgacaacccc
ctctggttcattggtctgcaagaagtcacaccaggattggcccgtacactctttcccgca
ctcgaacgagtcggctacgtcgtcattcatcaagaagacgcgccctacggcgtagccctg
gcggtcaaacaacaagacgccgccgacgggagcccctgtccagtagtactcgacttcggc
tggaaagacttctcccgaacagtgatgcaacgtggattcttgttcgtgcgggtacgtttg
ccgggatccgagaattcgaccaccgcagcacaatgcatcgtcacgacaacgcatctggaa
agctacatgccagccactgaacgcgacccagtctacacgggatcggaacaacggcatcta
cagttggagcaaatgcaagaattctgtcacaaagaaatggcaagacaccgtgcggtccaa
accgttattttgacgggagacatgaattgggacgacgagcgtaaaacccccttcgacaag
ccattgttgggatacctgccaagcacacagaattggaaggatgcctggttgacctctcag
ctcgccaaagacaagggttatacttacgatggtaagctgaacccaatgctgggaagtaat
ttgcggcgtcgcttcgatcgttgtctggtgcacaccaacgcggtggaggatgcggcaacg
gaaataatctcaaccctcatgattggcaaattggcgattccgaacttgacgtggcaaaag
tacaactcgtggaagcagacgtacaaggagacgcccaccgcacccagcgaccactttgga
ctcgttacacagttgcgctaccacgcttga
DBGET
integrated database retrieval system