KEGG   Phaeodactylum tricornutum: PHATRDRAFT_45524
Entry
PHATRDRAFT_45524  CDS       T01075                                 
Name
(RefSeq) hypothetical protein
  KO
K11984  U4/U6.U5 tri-snRNP-associated protein 1
Organism
pti  Phaeodactylum tricornutum
Pathway
pti03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pti00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    PHATRDRAFT_45524
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pti03041]
    PHATRDRAFT_45524
   04121 Ubiquitin system [BR:pti04121]
    PHATRDRAFT_45524
Spliceosome [BR:pti03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP specific factors
    PHATRDRAFT_45524
Ubiquitin system [BR:pti04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    PHATRDRAFT_45524
SSDB
Motif
Pfam: SART-1 HIND
Other DBs
NCBI-GeneID: 7200603
NCBI-ProteinID: XP_002179847
JGI: 45524
UniProt: B7FXZ4
LinkDB
Position
7:complement(<450298..>452823)
AA seq 805 aa
MPLFFRGKRAKSRHDNLVAMSNEPSSEVLELSVAETNRLRASLGLAPLRGVSGILAEASP
AAADTTTHASSKEELVLSVEATNVLRSQLGLAPLRDTANEVTPTTQHSSRLRHAPAENQG
DRQQAAERIEQARLRRQVEQNVAQLYGEASLAENATINAQSWAQSFRARPTAEPAARQPP
STESSSSTAPAAYTAQDLRGLRVAHAVQDFQDNATTVLTLTDSSLLTRDEASGKVLGLTH
DQDASALENVDLATARIQQDGLREKRKVEMGMGRAGGYAGYDDDEFEELGGTQGPSRAGR
RPHLERGEENARPSEVAKSNRGFSIGAVLDEYDRKEVASSDLFASKHQAISLEPTRADVT
ASDFMTAEEERVLRAAKKESTKFKKKKKKSKTKTSRTTNTDDGDESEKNRESSLLDELEE
TAVEGSSGALQSRKRRRRQHDDTEENEDKALKVKPDKPPSMHVDNSSHDAPSAAEKRAKY
DAIMAKGNERTKAAFAVPKIKTVDLDDEPDDAFLNAALAKARRLNRLKEMTSKAETVLSH
KGADAVLQALQSSNKPADSSLTTGSTNTISFSVDDTREFTRALRARDEQVERELSKRYVK
SEREQVVKQGTTVQQPTVSTVDGDQDAMDTGDVDMHELAKEVKEDHVTALEGTTGTDVPV
GRGLAGMLNILKQNGDMTRKNAGKEELRGRAKDERNYEDYEPLDLKKVVKIDGRKANDKD
KEFAKREVKLEYRDKHGRLLTRKEAFRDLSYQFHGYTSGKRKEEKKLQQIAREQAEVAVA
ARQAGEGGTLGALRATQKATGKAFV
NT seq 2415 nt   +upstreamnt  +downstreamnt
atgccactcttttttcgaggcaaacgtgcgaaatctcggcacgacaatttggtggcgatg
tcgaacgaaccgtcttcggaagtgttggagttgtcggtcgccgagacgaatcggttacgg
gcttcgttaggattggccccgctgcgtggggtctcgggcatcctcgccgaggcgtctcca
gctgccgcagatactaccacacacgcgagttctaaagaagaattggtcttatcggtggag
gcaactaacgttttgcggtcccaattgggtctcgcgcccttgcgtgacacagcgaatgaa
gtgactcccacgacacaacacagtagccgtttacggcacgctccggccgagaatcaagga
gatcgccaacaagcagcggaacggattgagcaggctcgattgcggagacaagtagaacag
aacgtcgcacaattgtacggtgaagcatcgttggccgaaaacgcgacgatcaacgcccag
tcctgggcgcaatccttccgcgcgcgacccacggcggaaccagcggctcggcagcccccg
tcgacggaatcctcctcctctactgcaccggcggcgtacaccgcccaagacttgcggggg
ctgcgggtagcccacgcagtccaggattttcaggataacgccacgacggtcctgactttg
accgattcttctttgctgactcgggacgaagcgtccggcaaagtgctcggattaacacac
gatcaagatgcttcggctctcgaaaacgtcgatttggcgacagcccggatacaacaggac
ggattgcgtgaaaagcggaaagtggaaatgggcatgggccgggccggtggctacgctggc
tacgacgatgatgagtttgaagaattgggcggcacgcaggggccatcccgcgcgggacga
cgaccgcatctcgaacgcggcgaagagaatgctcgaccgtccgaagtagcgaaatcaaat
agaggcttttctattggggccgtgttggatgaatacgatcgcaaagaagtggcgtcgtcg
gatttgtttgcgagcaagcaccaggccatttcattggagcccactcgtgccgacgtgacg
gcctcggactttatgacggcagaagaagaacgagtactccgggcggctaaaaaggaatcc
acaaagttcaaaaagaaaaagaagaaatccaaaactaaaacgagtcgaacaacaaatact
gatgatggcgatgaaagtgaaaaaaatagagaatcgtcacttttggatgagttggaagaa
acagcggtggaaggttcctcaggtgcattacaatctcgcaagcggcgtcgtcgacaacac
gatgatacggaggagaatgaggataaagcactgaaagtcaaacccgacaagccaccgtcg
atgcacgtagacaactcttcccacgatgcgccgtctgcggcggaaaagcgagccaagtac
gacgccatcatggccaagggcaacgagcgaaccaaggccgcatttgcggttcctaagatc
aagacggttgacctggatgatgaaccggacgatgcatttttaaatgcagccttggccaaa
gcccgtcgtctgaacagactcaaagaaatgacctccaaggccgagactgtattatctcat
aagggagcagatgcggtgttgcaagcgcttcaatcttccaacaagcctgctgactcttct
ttgactaccggtagcaccaatactatttccttctcagtggatgacacgcgggaatttacc
cgggcacttcgtgcgcgagacgaacaagtggagcgggaattaagcaaacgctacgtcaaa
agtgaaagagagcaggtggtcaagcagggtacgactgtccaacagccaacagtgtctacg
gtcgacggcgaccaggatgctatggatacaggggatgtggatatgcacgagctggcgaaa
gaagtgaaagaggatcacgtcacggctctagagggaacgacgggaactgatgttcctgta
ggccgtggcttagctggaatgctaaatattctcaagcagaatggtgacatgactcgtaaa
aatgccggcaaagaagagttacggggccgcgccaaggatgaacgtaactacgaggattac
gaaccactcgatttgaaaaaggttgtcaaaatcgatggccgcaaggcgaacgataaggac
aaggagtttgccaaacgcgaagtcaaattggagtatcgcgataagcacggtcgtctgctg
acccgcaaggaagcctttcgcgatctcagttaccagtttcatggttacacaagtggaaag
cgcaaagaagaaaagaagctgcaacaaatagccagggagcaagccgaagtggcagtggcc
gcaagacaagccggtgaaggtggaacactaggggcattgcgagccacacaaaaagccacg
ggcaaagcatttgtt

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