Phaeodactylum tricornutum: PHATRDRAFT_45601
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Entry
PHATRDRAFT_45601 CDS
T01075
Symbol
SybD
Name
(RefSeq) hypothetical protein
KO
K08515
vesicle-associated membrane protein 7
Organism
pti
Phaeodactylum tricornutum
Brite
KEGG Orthology (KO) [BR:
pti00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
PHATRDRAFT_45601 (SybD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pti04131
]
PHATRDRAFT_45601 (SybD)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pti04147
]
PHATRDRAFT_45601 (SybD)
Membrane trafficking [BR:
pti04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
VAMP
PHATRDRAFT_45601 (SybD)
Exosome [BR:
pti04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
PHATRDRAFT_45601 (SybD)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Synaptobrevin
Longin
Motif
Other DBs
NCBI-GeneID:
7200645
NCBI-ProteinID:
XP_002179892
JGI:
45601
UniProt:
B7FY81
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Position
7:complement(660667..661578)
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AA seq
274 aa
AA seq
DB search
MIVYAMICRAIDAAVLVEFAEELQGNAPQVTSSLMESLRDHPELVNEGDRKTYVQRNESQ
SDIISHFLESCAVALGDQGNSVEEFYFHLFKMNGIFYCCIGDDPDTRDQKVNFAFLEHIC
NEFVTTFRSSRIESANAYSLDKQFKPTLRSSMHHYNTNHKSIGQEDKVRCVLAQVEDMKA
VMGRNINLLLSRGEDLNAMSQKSDTMQEDAMVFKKNTTTAAWKLQRQVYLYGLLAALGIV
LLIYMISISVCGARLKYCRSSRASRNNSTNTGGN
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgatcgtctacgctatgatttgtcgagcgatcgacgcagcagtgctagtggagttcgct
gaagaactccaaggcaacgcaccacaagtaacgtcttcgttgatggaaagcttgcgagac
caccctgaacttgtcaatgaaggcgatcgcaaaacttatgtgcaacgaaacgaatcacaa
agtgatatcatttcacattttttggaatcctgcgccgtcgctctaggagatcaaggaaat
agcgtagaggagttttattttcacttgttcaaaatgaatggtatcttttactgctgcatc
ggagacgatcctgatactcgagatcagaaggtcaactttgcgtttctagaacacatttgc
aatgaatttgtcacgacatttcgatcgagtcgtattgaaagtgcgaacgcttactcctta
gacaaacagtttaaaccgacactgcgctcctccatgcatcattacaatactaatcacaaa
tcgattggccaagaggacaaggttcgctgtgttttggctcaagttgaggatatgaaggct
gtcatgggccggaatattaatttacttttgagtcgaggagaagatttaaatgcaatgagc
cagaagtcggacactatgcaggaggatgctatggtattcaagaaaaacaccaccacagca
gcatggaagttgcaacgacaagtttacctttatggactcctcgccgcattgggtattgtg
ctattgatttatatgatatcgattagtgtttgcggggcacgtctcaaatactgtcgttcc
agccgggcaagtaggaacaacagcactaatacgggaggaaattga
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