Phaeodactylum tricornutum: PHATRDRAFT_45888
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Entry
PHATRDRAFT_45888 CDS
T01075
Name
(RefSeq) hypothetical protein
KO
K14771
U3 small nucleolar RNA-associated protein 19
Organism
pti
Phaeodactylum tricornutum
Brite
KEGG Orthology (KO) [BR:
pti00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pti03009
]
PHATRDRAFT_45888
Ribosome biogenesis [BR:
pti03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
PHATRDRAFT_45888
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Gene cluster
GFIT
Motif
Pfam:
CBF
Motif
Other DBs
NCBI-GeneID:
7200980
NCBI-ProteinID:
XP_002180079
JGI:
45888
UniProt:
B7FZ19
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Position
8:580573..582446
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AA seq
590 aa
AA seq
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MTMAISTKTATTKMSSSAEIATQIKTLLKPHNDEGLDAARLDELRKVFASLIQSNEFSLE
RTPTRNSSLPLSSSSVQHKWHAFLRTSHKKFLLQLCDRVESGKRTALRTLWGVVATSPTL
SSNSAYQVVSTTLLRLLVRVVSRLPTWDKSIHHMLQAEFLQPYRDVQYYTLIATVTIANE
IYKQGTSVEEDDQEKQVQAERLVQLLMLIPIPTSQQELDNDDGLLFPPPKNAVPERLHED
DNAASDDSGGDDDDDDDATVASTSSVEDADTNDKPEQHKEPARKKRKTVQRFAFSQLRCH
HRAWSRAWLAVLRLPLSTSSLKQTLIFLPSKVLPNVHDPLHFADFFMSAYDQPQKLHSVL
ALDGLFLLITKHGLEYPGFYKQLYKLLTPSVFYVKYKPRFLRLLETCISRNELLPAHIVA
AFIKRTLRCCLQAPPASILVGLALCSNWLRKHGETACLVHRLPPIDSDGDGNLRDAFDSE
TDDPEQAQALQSSLWELEALSQHYYPAVVTMAKSIGREDELQTPLHDITDFLSHTYKSLF
EQERKRKSTKKFKPSLTFVQPEGLFLTDDVFAGFLSSRSSPGTAEEGTNE
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgaccatggctatatccacgaaaacggcgacgaccaagatgtcctcgtcggccgagatt
gcgacgcaaatcaaaacgctgctgaagcctcataacgacgaaggactggacgccgctcga
ctcgacgaacttcgtaaagtctttgccagcttgatccagtcgaacgagttttctctcgag
aggacaccaactcgcaattcttcattgccattgtcgtcctccagtgtccagcacaaatgg
cacgcctttctccgaacgtctcacaagaagtttctgctccaattgtgcgaccgcgtcgaa
tcgggcaaacggacggcactgcgtaccttgtggggcgtcgtcgctacctcgccgacgcta
tccagcaacagcgcttaccaagtggtttccactacactgctgcgactcttggtccgggtg
gtttcccgattgccgacctgggacaagtctatacaccacatgctgcaggccgagtttctc
caaccctatcgggatgtacagtactacactctgatcgccacggtcacaattgctaacgaa
atttacaagcaagggacgagcgtggaagaggatgatcaagagaaacaggtgcaggcggag
cggttggtgcagctcctcatgctcattcccattcccacctcgcaacaggaactagacaac
gacgacggcttgctgttcccgcccccaaagaatgccgtaccggaacgcctacacgaagac
gacaatgcggcaagcgacgatagcggtggcgatgatgatgatgatgatgatgcaacggtg
gcctcaacgtcttcagtggaagatgccgacacaaacgacaaacccgaacaacacaaggaa
cccgctaggaaaaagcgcaaaactgttcagcgcttcgccttctcccaactacggtgtcat
caccgggcttggtcaagagcctggttggccgtcttgcgtttaccgctttctacttccagt
ctcaaacagaccctcattttcttgccttcgaaagtcttgcccaatgtccacgatccgctc
cactttgccgactttttcatgtccgcgtacgatcaaccgcaaaagttacactccgtgctg
gccttggacggactgtttttgctcatcaccaagcacggcttggagtatcctggtttttat
aaacaactctacaaactcctcacaccgagtgtcttttacgtgaagtataagcctcgcttc
ttgcgtttgctagagacatgtatcagtcgcaacgaacttttaccggcgcatatagttgcg
gccttcattaagcgcacattgcggtgttgtttacaagcgccaccagcgagtatcctcgtc
ggattggctctttgctccaactggttgcggaaacacggagaaacggcatgcctcgttcat
aggctgcctccgattgattccgatggtgacggtaatttgcgagacgcttttgacagcgag
acggatgacccggaacaagcccaagccctgcaaagttccctttgggaactggaggccctt
tcgcaacactattatcccgccgtcgtgaccatggcaaaatccattggacgagaagacgaa
ctgcaaacccccttgcacgacatcacggattttctgtcgcacacctataagtctctgttc
gaacaggaacgcaagcggaaaagtacgaaaaaattcaagccatctctcacttttgttcaa
ccagaaggcttgtttctcacggacgatgtattcgctggcttcttgtcgtcgaggtcatct
cctggtacagccgaagaaggcacgaatgaatga
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