Phaeodactylum tricornutum: PHATRDRAFT_46402
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Entry
PHATRDRAFT_46402 CDS
T01075
Name
(RefSeq) hypothetical protein
KO
K13212
RNA-binding protein Luc7-like
Organism
pti
Phaeodactylum tricornutum
Brite
KEGG Orthology (KO) [BR:
pti00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pti03041
]
PHATRDRAFT_46402
Spliceosome [BR:
pti03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
PHATRDRAFT_46402
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LUC7
MGS_GT
Motif
Other DBs
NCBI-GeneID:
7201773
NCBI-ProteinID:
XP_002180782
JGI:
46402
UniProt:
B7G135
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All DBs
Position
10:228929..>230435
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AA seq
473 aa
AA seq
DB search
MAAEEARQMLDALMGGDRNAPLPPGAAVPRRGGRGGGDLLLLPGKKARSCYDPDIDPLYT
AWGVDVFELFVNTKSDLGVTNPYVADPDAHAEYKALPPAEQARLGYDYFLFQKLSELTRQ
CDRVVSRNKEKLRQEIARKQSQSSQAAVDYVENVDPQAVELLARNIIQKEDMEVELANRL
GELDALVAKETTAKTELGDLFQKPKQSDVEPTPAVEESGVIGNNKVKEEQNGDSAEAAPE
SEPQQHNESDAETKVEPEVKREDESVKDEEEKPLPDAAVPLPTPPVDPELQALQLQLGRV
TLDKQKTLYDLARLVARLAALEESVESQTRQLNYVRSDISTDKTVCEVSGNFMSARDADE
RIAAHYAGKQYVGWKLVRDKLASMIQQYGRYGPPPPSSRGPPPPSAMNAGPAFSGGRGGA
APPPSRGHGSSDGGDRGFRDRGGSGGFGRGGGGYQDRGRPAMGGPPPRGNWRR
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggaagaggctcgtcagatgctggacgcgctcatgggcggcgaccggaacgcc
ccgctgccaccgggagcggcggtaccacgacggggcggtcgcggcggtggcgacctgttg
ttgctaccgggcaaaaaggcccgatcctgttacgatccggacattgatccgctgtacacg
gcttggggagtggacgtctttgaactcttcgtcaacaccaaatccgatttgggcgtcacc
aatccctacgtcgccgaccccgacgcccacgcggaatacaaggctctgccaccggcagag
caagcgagactcggttacgactactttctctttcagaaattgtccgaactcactcgtcag
tgtgatcgtgtcgtgtcccggaacaaggaaaagctgcggcaggaaattgcgcgcaaacag
tcccaatcctcgcaagcggcggtggattacgtggaaaacgtcgatccgcaagcggtcgag
ttgctggcgcggaatattatacaaaaagaagacatggaagttgaactcgctaaccggttg
ggggagttggatgccctggtcgccaaagaaaccacggcgaaaacggaactcggagatctc
ttccaaaagccgaaacagtcggacgtagagcccacacccgccgtggaagaatcgggagtc
atcggcaacaacaaggttaaagaggaacaaaatggagattctgcggaagccgcacccgaa
tccgaaccgcaacagcacaatgaatcggatgcagaaacaaaagtagagcccgaggtcaaa
agagaagacgagagtgtcaaggatgaggaggagaaacccttgcccgacgctgcagtcccg
ctaccgacaccaccggtggatccagagttgcaagccctccaactccagctcggtcgcgtc
acgcttgacaaacaaaagacactatatgatctcgcccgcctcgtggctcgcttggccgcc
ctggaagaatccgtcgagtcgcaaacccgtcagctgaattacgtccggtccgatatttct
accgacaagaccgtgtgcgaagtttcgggcaacttcatgtcagcccgggatgcggatgaa
cgcatcgcggcgcattacgcaggcaaacagtacgtggggtggaaactagtgcgggacaaa
ttggcgagtatgattcagcaatacggacgatacggaccgccgccaccgtcctcgcggggt
cctccgccaccgtcggcgatgaacgcgggccctgcgttcagtggcggacgcggtggagca
gccccacctccttcacggggacacggatcttcggatggtggtgatcgaggctttcgggat
cggggtggctctggtggtttcggacgcggtggtgggggctatcaagatcggggtcgtccg
gcaatgggtgggccaccgcctcgcggcaattggcgaaggtaa
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