Phaeodactylum tricornutum: PHATRDRAFT_46440
Help
Entry
PHATRDRAFT_46440 CDS
T01075
Name
(RefSeq) hypothetical protein
KO
K14301
nuclear pore complex protein Nup107
Organism
pti
Phaeodactylum tricornutum
Pathway
pti03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pti00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
PHATRDRAFT_46440
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pti03019
]
PHATRDRAFT_46440
03036 Chromosome and associated proteins [BR:
pti03036
]
PHATRDRAFT_46440
Messenger RNA biogenesis [BR:
pti03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
PHATRDRAFT_46440
Chromosome and associated proteins [BR:
pti03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
PHATRDRAFT_46440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup84_Nup100
CysG_dimeriser
Motif
Other DBs
NCBI-GeneID:
7201543
NCBI-ProteinID:
XP_002180990
JGI:
46440
UniProt:
B7G183
LinkDB
All DBs
Position
10:complement(345965..349057)
Genome browser
AA seq
1030 aa
AA seq
DB search
MSLPPLSVRKRGVKDPRPYEPTTTQAAEDAVARIMDSLGTAVSPHLGKVNLQKGLYNESS
GTSTRYRYERTEESWLERALTTDDDDAMETDELVTGSANSKKPRILERATTPIISNASHR
SQDRDEIMSPVPLRSPSPTDDAGITGNDTYLRRTPTTLRTGHVAGPSSRHDALEYGRYHD
AVLRFVQVKRRVTERVELKQRSLALQEERTSPRVPFDDAMELVPDDLFIANRDGDALILD
ETRADVAFLRSLHNLSSDHVNASDARLARKEGNFWLLLSHLRELSLDTLIWADDAASLHQ
HESSLLAYVDSLAAKVNAAPLELTQALQLNTSECPSLLRRRQCIMRWLEACFHQQLPTGS
TRARHATIICDSKLLRQEGLPETDKDAEILKNALALILAGREEDAQILARDSGAPWRAAL
WSGGKPQGVVHKPNLATETMDRIPTGNPRRALWKRMMWKNAEALHQKGKAAADEAAIAAI
LSNNLKIALLNPSLRTWEKCLYVAFRCMIGRTEDDLLHKHNNLRRQYRPPFPGTQFAQHE
LQQLRDTADIAAEDEASVIHNILPSSVFDEVKDDDVVTDATSSFLVGKSSIASYLQDSMA
DLDDAGEMQLRFLTHLGLYLDSLAVGTTPIFIQGVSDWKNRMLLKYLQYLSTREELWHLL
VLYASLLPESVLTSQLPNMLQSLDSQEGRRTIVEQMRELLPRAGLDLVVLQNVVQATLQT
TDTENSCVDTPTRLDVQKMRSIAWLSYSQDHTVDALVFSNSLLRHFLLGGRRASAILFVE
DFRLESVLELAEGNGEDEAADVDTWRREHMALQYYLDATQAIDHWREIISTVESTTKLID
DRIDIGRLDETDVSVALKIERRALLEEKRKASFSVVRASNSALKALSAVLKYRGGWLLLD
YDAASRHCDQNARSAELDALRRKILPHCISSYCEVCMETAVWMSSSMDDAVAQLSESPSA
VLDSLDSPQDGEISPIAPFYWPQQALEIANVVASETYGILSAFGTAEKKQLVSDLAEASV
ANLFYTTKRD
NT seq
3093 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcttccgccgttatcggtgcgcaaacgcggcgtcaaggatccgcggccgtacgag
ccaacaacaacccaggcggcggaggatgcagtcgcccggattatggattcgttggggact
gccgtttccccacacttggggaaagtgaatttacagaaaggactgtacaatgagagcagt
ggcacatcaacacggtaccggtacgagcgtacggaagaaagttggttggaacgcgcgtta
acaacggacgatgacgacgccatggagacggacgaactcgttacgggctcggcaaattcc
aaaaagccgcggattctggaacgcgccacgacgccgatcataagtaacgcgagtcacagg
tcgcaggaccgcgacgaaatcatgtctcccgtccctctccgttcaccctctcccacggat
gatgctgggatcaccgggaacgacacttatctgcggcgtacccctaccacgctgcgtacg
ggacacgtggctggcccatcgtctcggcacgatgctctcgagtatgggcgctatcacgat
gccgtattgcgcttcgtacaagtcaaacgtcgtgtcacggaacgcgtcgaactcaaacaa
cgttcgttggcactccaggaggagagaacctcaccgcgcgtaccgttcgacgacgccatg
gagcttgttcccgacgaccttttcatcgcgaaccgggatggagatgcgttaatcttggac
gaaacacgagcggacgttgcgttcttgcgttccttacacaacctctcctcggaccatgtc
aatgcaagcgatgctcgtttggcacgcaaagagggcaacttctggctcctcctgtcgcat
ttacgagagttgagtttagataccttgatctgggctgacgatgctgcctctctacaccag
cacgagagttcactgttggcctatgttgattccctcgctgccaaggtcaacgccgcccca
ctggaactcacgcaggcattgcaactgaatacgtctgagtgtccatcattgcttcgtcgt
cgtcagtgcatcatgcgttggctggaagcctgttttcatcagcagttgccgacaggatcc
acccgcgctcgccatgccaccataatttgtgattccaagctcctgcggcaagaaggtttg
cccgagacggacaaggatgcggaaatactgaaaaatgcgttggccttgattttggccgga
cgagaggaggacgcacaaatattggctcgtgatagtggcgctccttggcgagcggcgctt
tggagtggagggaaaccacaaggtgtcgtgcacaagccgaacctcgcaaccgagacgatg
gatcggatccccacgggaaatccccgccgtgctttgtggaagcgcatgatgtggaaaaat
gccgaagcgctgcatcaaaagggaaaggcggcggcagacgaagctgcgattgccgccatt
ctttccaataatcttaagattgccctcttgaacccatccctcaggacgtgggagaagtgt
ctgtatgttgccttccgatgcatgatcggtcgcaccgaagatgacctgctacacaaacac
aacaatcttcgtcggcaataccgccctcccttccctggaacacagttcgcacaacacgaa
ctccagcagcttcgtgacactgctgacattgctgctgaagatgaggcctctgttattcat
aatatcttaccaagctctgtttttgacgaagtcaaagatgacgatgtagtgacggatgcc
acttcgagttttctggttggcaaaagttcgattgcgtcttacctacaggactcaatggcg
gacttggacgatgcaggagaaatgcagctacggttcctcacccacctgggtttgtacttg
gattcactagcggtaggcacaacgccaatcttcattcaaggagtttcggactggaagaac
agaatgttgttgaagtacttgcagtatttgtccacccgcgaagaactatggcatttgctt
gtactttacgcgtcgttgctaccggagtcggtcttgacgtctcaacttcccaatatgctg
caaagccttgacagtcaagaaggccgcagaacgattgttgaacagatgcgtgaactttta
ccgcgtgcaggtttagatttggtagttcttcagaatgtggtacaagctactttgcaaacg
acggatacagagaattcctgtgtcgacactcccactcgtttggatgtccaaaagatgcgc
tcgattgcgtggctttcttacagtcaagaccatacggtggatgctctcgtattttctaac
tcactgctacggcacttccttcttgggggtcgtcgagcgagtgccatacttttcgtcgaa
gactttcggctggaaagtgtcttggagttagcggaaggcaatggagaagatgaagcagcg
gatgtagacacgtggcgacgtgaacacatggcactgcaatactacttggatgcgactcaa
gctattgaccactggcgtgagattatttctactgttgaaagcaccaccaaacttattgat
gatcggatcgacattggtcggttggatgaaacagacgtctcggtggcattgaagatcgaa
cgccgtgctttgctcgaagagaagcgcaaggctagcttctctgtcgtgagggcgtctaat
agcgcactcaaagctctttccgccgtcctaaagtatagaggcgggtggttgttactggac
tacgatgccgcatcaaggcactgcgaccaaaacgctcgttcggccgaactcgatgccttg
cgccgcaaaattttaccgcattgtatttctagctattgcgaagtctgcatggagacggca
gtgtggatgtcatcctccatggacgatgctgttgctcaactgagtgaaagcccttccgct
gtgttggattcgctcgacagtccccaggacggtgaaatatctccaatcgcccctttctat
tggccacagcaagcattggaaattgccaatgttgttgcatcagaaacctatggtatcctc
tctgctttcgggacggcagaaaagaaacagctcgtttccgatttagcggaggcgtctgta
gccaacctcttttatactacgaaaagagactag
DBGET
integrated database retrieval system
