Phaeodactylum tricornutum: PHATRDRAFT_46971
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Entry
PHATRDRAFT_46971 CDS
T01075
Name
(RefSeq) hypothetical protein
KO
K15338
holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
Organism
pti
Phaeodactylum tricornutum
Brite
KEGG Orthology (KO) [BR:
pti00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pti03400
]
PHATRDRAFT_46971
DNA repair and recombination proteins [BR:
pti03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
PHATRDRAFT_46971
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Chromo_2
XPG_I
XPG_N
Motif
Other DBs
NCBI-GeneID:
7202079
NCBI-ProteinID:
XP_002181293
JGI:
46971
UniProt:
B7G202
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Position
12:complement(<44406..>46496)
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AA seq
696 aa
AA seq
DB search
MTVSSLWKVLDKAGCATPVGIAEFTVYDPQHYARSQEAPNEASPWNHNLGVRPSAIREQH
KATTLAVDLSIWICESLTSRAMTENHANPALHLVFSRTMKLLSLGIKLIFVLEGKRRVQT
AGKRDNFRNRRSGTTFWKAGEQCHDLLTRLGIPVFRAKAEGEALCALLSQRNIVDGVISN
DGDCLLFGARVVYTKFSVENLVEGSVMRYDLGNLRALIDHAGDKEASDQLTGSLSLSRFD
LLSFALLTGSDLAGNGLPKVGHKKAIRFIRKCQIDNPLTTEMASIDEVKSWAVAAHVRPT
NLPHQTKANEKCCSRCCHIGTKHSHEKLGCEACGTAPGEPCYAFSTEDRFRKSLREKALK
VIPIFEPSQVVEAYLRPNDNQLPAQLAGKTSNQIKMDPPDLNALLQLPLILKGRSQEESR
EYLVRSVGRLLSRAELFRKHEESDEKELMTSYRRARERPIPHKITNSMTQNGVPSYEVKW
LVNATVTDNFGEGIDGYEYSTVEPCDLIANRYPVLIKEFQQAEKERMKQGDGEKLRRLDF
LQSHLFLHRDPQRPSETGDAKKVKRSKHRAGFFETKEASLPKLYASSRRNNRSKRKTGDD
VGHLLRYIVRSSDITQDPLGFSPIDNSKYGLLPGTSLRGHCTPSPRKNVYKSKASLHSPE
GRVFCNMGGVFIEITPIISNRRTFPPRHIFIRRSSA
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atgacggtctcttctctctggaaagtcttggacaaggccggttgcgccaccccagtgggt
atagcagagtttactgtttatgacccacagcactacgctcgtagtcaagaagcacccaat
gaggcgagtccgtggaatcacaacctgggcgttcgtccatctgcaatacgagagcaacac
aaggcaaccacattggcggtggatttgtcaatttggatttgtgagtcccttacgtcccgt
gcgatgacggaaaatcacgccaatccggctcttcatctggtcttttcacgaacaatgaaa
ttgctttccctgggaataaagcttattttcgtgcttgaaggcaagcgacgcgtgcaaacg
gcgggaaagcgagacaattttcgtaatcggcgcagtggcactaccttttggaaagcaggt
gagcaatgtcatgacttgttgacacggcttggcattccagttttccgggccaaagccgaa
ggtgaagctctttgtgctttactttcacagcgcaatattgttgatggtgtaatttccaat
gatggggattgtctactattcggagcccgagttgtatacacgaaattctcggtcgaaaac
cttgttgaaggtagtgttatgcggtatgacctcggcaatcttcgagccctgattgaccac
gccggcgacaaagaagcctcagaccagcttactggatcgctttctctcagtcgttttgac
ctcctctcttttgcattgctcaccggcagcgacttagcagggaacggactaccgaaggtt
gggcacaaaaaggccattcgtttcattcgaaagtgccaaatcgacaacccccttacgact
gagatggcctccattgatgaggtgaaatcatgggcagttgccgctcatgttcgaccaacc
aacctgccacatcaaacgaaagcgaacgaaaaatgctgtagtcgctgctgtcatatcgga
accaagcacagccacgagaaactagggtgtgaagcttgtggtactgctcctggagaacca
tgctatgcattctctacggaagatcgcttccgaaagtctctccgcgaaaaagctctaaaa
gtcattccgatttttgagccttcccaggttgttgaggcctatctgcgacctaacgacaat
cagctccccgctcagctggctggcaagacctcaaatcaaataaagatggacccaccggac
ctcaacgctctcttgcaactccctctaatactcaagggtcgtagtcaggaagagagtcgc
gagtacttggttcgttcagttggccgcctcttatctcgtgctgaactatttcgaaagcac
gaggaaagcgatgaaaaagaactgatgacttcttatcgccgagcgcgagaaagacccatt
ccccacaaaattacgaactcaatgacgcagaacggagtgccttcttacgaggtaaaatgg
ttggttaacgctaccgtgactgataatttcggtgaaggaatcgatggctacgaatattcc
acggttgaaccttgtgacctgatagcgaaccgttaccccgtcctaataaaggagtttcag
caagcggagaaagagcgtatgaagcaaggagacggagaaaagcttcgtcgtttagacttt
ctacaatcgcacctgttccttcacagagacccgcaacgtccttcagaaaccggcgacgca
aagaaggtgaaacgatcgaagcaccgagcaggattctttgagaccaaagaagcaagcctt
ccaaaactctacgcatcaagcagacgaaataatcgatccaagcgcaagacgggagatgac
gttggtcatttgttacgttatattgtccgttctagcgacatcacacaagatccattggga
ttcagtccgattgacaactccaaatatggattacttcctggaacgagcttgcgcggtcac
tgtactccatcgccgcgaaagaacgtatacaaatcaaaagcttcattgcactcaccggaa
ggaagggtgttttgcaatatgggtggtgtattcattgagattacgccgattatatccaac
cgtcgtaccttcccaccccgtcacatattcattcgccggagttcagcctag
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