Phaeodactylum tricornutum: PHATRDRAFT_47039
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Entry
PHATRDRAFT_47039 CDS
T01075
Name
(RefSeq) hypothetical protein
KO
K03262
translation initiation factor 5
Organism
pti
Phaeodactylum tricornutum
Brite
KEGG Orthology (KO) [BR:
pti00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
pti03012
]
PHATRDRAFT_47039
Translation factors [BR:
pti03012
]
Eukaryotic type
Initiation factors
eIF-5
PHATRDRAFT_47039
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eIF-5_eIF-2B
W2
CIS_TMP
Zn_ribbon_IS1595
Zip
CDC45
RNA_pol_Rpc4
DZR
Motif
Other DBs
NCBI-GeneID:
7202122
NCBI-ProteinID:
XP_002181337
JGI:
47039
UniProt:
B7G289
LinkDB
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Position
12:complement(250613..252596)
Genome browser
AA seq
413 aa
AA seq
DB search
MVVRGGTIINISGASPVDDPEYRYKMPAVFGKIEGSGNGIKTVIPNITEVALSLHRQPGE
VNKFFGTELGAQTRYSAETDRAVVNGAHMDAVLQDLMHRYIERFVLCPNCNLPETDYKIK
NDAIWHKCAACGAKEMVDMSHKLCNYILAEDKKAKKDSKKSKKGDKDDKKKKDKKKDKDS
DDEKKKKKDKKKSKDKKSKDKKEKNGDDEDEKDYIKEALEGGKTENNGLLNSDDEDSVSL
ASEAGVDDQGALLLAVEATKKYIAENSDVSDKELSEVVTNQQMASALKSHDKVHIIVRAA
LSAQFFKNKEIEKYSSAIYSITSGNKIMERHLIASLEALCIDKPKNFPVMIKQFYDEDAL
AEETILEWADEGRSEFTLPEVDEDVRATLRGEAEPVVVWLQEADSEDDSSDED
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atggtggtccgtggaggaactataattaacatttccggtgcttcgccggtagatgatccc
gagtatcgctacaagatgcccgcggtttttggaaagattgaagggtctgggaatggtatc
aagacagtgattcccaacatcactgaagtggctctttctttgcaccggcagcccggcgag
gtcaacaagtttttcggaacggaacttggcgcgcagacgcgttacagtgccgaaacggat
cgcgctgttgtaaatggcgcgcatatggacgccgttcttcaggatttgatgcatcgttac
attgaacggtttgtgctatgccccaactgcaacctgcctgagacggactacaaaattaag
aatgatgctatttggcacaagtgcgcagcttgtggagctaaagaaatggtggacatgagc
cacaagctctgcaactacattcttgcggaggacaagaaagccaagaaagacagcaagaaa
agtaaaaagggtgataaggatgacaagaagaagaaagacaaaaagaaggacaaagacagc
gatgacgagaaaaagaagaaaaaggacaaaaagaagagcaaggataagaaaagcaaagac
aagaaagagaagaacggcgacgacgaagacgaaaaggattacatcaaggaggctctcgag
ggtgggaaaacggaaaataatggtcttttgaacagcgacgacgaagacagcgtgtctctt
gcctctgaagctggcgtcgatgatcagggtgccttgctgcttgctgtcgaagctacaaaa
aagtatattgcggagaattccgatgttagtgataaagagctttctgaggtcgtgactaat
caacaaatggcttcagccctcaagtcgcacgacaaggtccatattatcgtgcgtgcggcg
ctctccgctcaattcttcaaaaacaaggaaatcgagaagtattcttcggccatctatagc
atcacgagtggcaacaagatcatggaacgtcatttgattgcgtcgctcgaggccctgtgc
atcgataagcccaagaactttcccgtcatgatcaaacagttttatgacgaggatgccctt
gctgaggaaacaattctggaatgggccgacgaaggtcgctcagagtttaccctaccagaa
gtggacgaggatgttcgagctacacttcgtggagaagctgagcctgtggttgtctggttg
caggaagccgatagcgaagacgattccagtgacgaggattag
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