Phaeodactylum tricornutum: PHATRDRAFT_47127
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Entry
PHATRDRAFT_47127 CDS
T01075
Name
(RefSeq) hypothetical protein
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
pti
Phaeodactylum tricornutum
Pathway
pti03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
pti00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
PHATRDRAFT_47127
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pti03400
]
PHATRDRAFT_47127
DNA repair and recombination proteins [BR:
pti03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
PHATRDRAFT_47127
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Ku_N
VWA_2
Motif
Other DBs
NCBI-GeneID:
7201925
NCBI-ProteinID:
XP_002181221
JGI:
47127
UniProt:
B7G2K3
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Position
12:530518..532180
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AA seq
517 aa
AA seq
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MNRPYPRATNTRDTASNTTTTRLDCAKQIVTTMVSDLMLQSSANEVCVIVLKTRETSHHK
LAAAGCDLDEEQMDASVPFPNLTDLTNHGVTKPSADLLRKIQNVQSVSEQEASALRGDVC
DGLILAADALYERTHGKKYQRQIVILTDAEHDIVVENSQTLLVVDALRAMDCRLQVVGFD
FLLSASYEQPMEASSLSLNTNAPKPAKTEPDTVSTKRLKKSTDYDSSETEDEDGFATCTQ
KTELDRNDPGQILYSTKEDREQLLSSLAEKTGGDVMAVSTLRQILQVDKGRSLKKATKRK
IELRIAPGIVLPVRSLKMLSKETTLGMKKTAVIGTNKSDTYSTAGNDKAEMDDVRNVYMF
VDPDHKDDVVEPQETIKAVRYGSDLIPMSSYDYEGLKSSANYIPYLEILGYTSRAAIPLV
ALIGPPYALSGSDSRKACAAISALAKSLEQLDRVAICTYMKTKGGDPILGGLFPLSEPQF
KHAARLMFLQLPFAGDMKQLGVVRSEVRFGAPGTKPK
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atgaatcggccgtatccgcgtgcgacgaacactcgtgatacggcgtccaacaccactacc
acccgactcgattgcgcgaaacaaatcgtgaccaccatggtcagtgatctcatgttacag
tcatctgccaacgaagtctgcgtcattgtattgaaaacccgggaaacatctcaccacaag
ttagcagcagctggatgtgacctggacgaagaacaaatggatgcatccgtgccgttcccc
aacttgaccgacctcaccaaccacggggtcacgaaaccatcggcagacttgctgcggaaa
attcaaaacgtgcaatcggtatcggagcaagaggcctccgccttacgcggtgacgtgtgc
gacggtctcattctcgccgccgacgccctgtacgagcgcacgcacggcaaaaaataccag
cgccagattgtcattctcacggatgccgaacacgatatcgtcgtggaaaattcacaaact
ttgctggtcgtggatgccttgcgtgccatggactgtcgattgcaggtggtcggctttgat
tttctgttgtcggcatcgtacgaacaacccatggaggcgtcatcgctgtctctgaataca
aacgccccaaagccggccaagacggaaccggacactgtgtccaccaaacgattaaaaaag
agtaccgattacgacagctctgaaacggaagacgaggacggcttcgcgacttgtactcaa
aagaccgaactcgaccgtaatgatcccgggcaaattctgtattccaccaaggaagatcgt
gaacaactcctgtccagtctggcggaaaagacgggtggggacgtcatggcggtttccacc
ttgcgacaaatcctccaagttgacaagggtagaagcctcaagaaagccacgaaacgaaaa
atcgagttacgcatcgctccaggcattgtcctacctgtccggtccctcaaaatgctcagt
aaagaaactacattgggaatgaaaaagacagccgtcatagggaccaataagagcgataca
tattcaactgcaggcaacgacaaagccgagatggacgacgtaaggaacgtgtacatgttt
gttgatccagatcacaaggacgatgtagtggagccacaggaaaccataaaggctgtcagg
tacggatccgatttgattcctatgagcagctatgattacgaagggttgaagagttccgcc
aattacattccatatctagaaatattgggatacacatctcgtgcagcaattccactggta
gcccttatcggacctccttacgctctttctggaagcgattcacgcaaagcctgtgccgcg
atttcagcacttgccaaaagcctggagcagctcgacagagtagctatttgcacctatatg
aaaaccaaaggcggtgatcctattctcggtggtctatttccactgtccgaaccacagttc
aagcacgcagcccgcctcatgtttctgcagctacccttcgctggcgatatgaaacaactt
ggagtggtcaggtccgaagttcgttttggcgctcctggaaccaaaccaaagtga
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