Phaeodactylum tricornutum: PHATRDRAFT_47176
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Entry
PHATRDRAFT_47176 CDS
T01075
Name
(RefSeq) hypothetical protein
KO
K21971
methyltransferase NSUN6 [EC:2.1.1.-]
Organism
pti
Phaeodactylum tricornutum
Brite
KEGG Orthology (KO) [BR:
pti00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pti03016
]
PHATRDRAFT_47176
Transfer RNA biogenesis [BR:
pti03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
PHATRDRAFT_47176
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
PUA
RsmF-B_ferredox
FtsJ
Fibrillarin
Motif
Other DBs
NCBI-GeneID:
7201956
NCBI-ProteinID:
XP_002181253
JGI:
47176
UniProt:
B7G2R7
LinkDB
All DBs
Position
12:717403..720295
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AA seq
435 aa
AA seq
DB search
MNASDRPTLLSIEELSVLVSSPVRTHLAGAYRGLYPAANDPAQKLQHEQHLEKVLAAMKV
SPRTSTFRVNTIRATRTEVVDKLVLAMNEWAEREGLCTPNPLPISVAAHAVLEDIVSVDI
AQSPTTLSSCRIPPLQVELDTDSSFGDEARRARRHRLGWPTTCKVIVCDRLCGEAVLRGS
HVFVRGILAADPSIRVGQALAVYADLPQPQRPSWPRGLAVESYTGTCVFVGIGQACCTHA
SSFDMGPLLPPLSGVLDTHAFLQNLPSTVVVHALNPQPGDTILDLCAAPGGKASHVASFT
KNQAVILAADRSRSKVVAMKQRFLALGCTSIVPLHLNATACCMDEPGRPRCSVAEIRAAA
KVSERDGLLNVKYFFPGSFDRILLDPPCSALGLRPKLQIGPTRVDDLLAFATYQRKFVPP
AVALLKPGGILTYRE
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcctcggatcggcccacgctactctccattgaggagttaagcgtcctcgtttca
tcccccgttcgcacgcacttggctggtgcgtatcgtggtctgtatcccgccgccaacgat
ccagcacaaaagctgcagcacgaacagcatctcgaaaaggtgcttgccgccatgaaagtt
tcgccccggacgtcgacttttcgcgtcaatacaatccgcgcaacgcgcacagaggttgtg
gacaaactggttctcgcaatgaatgagtgggccgagcgagaaggcctctgtacgcccaat
cccttgccaatctccgtcgcggctcatgccgtgctcgaggatatcgtatcggttgatatt
gcccagtctccgacgacactctcctcatgtcgaataccgcccctccaggtggagctcgac
accgactcatcgttcggggacgaggcgcgacgcgcccgccgtcaccgcctgggctggccc
accacgtgtaaggtgattgtttgcgatcgcttatgcggagaagcggttctccgcggatcg
cacgttttcgtccgcggaatcctcgcggcagatccctccattcgagtggggcaggccctg
gccgtctacgctgacttgccgcaaccccaacgaccgtcttggcctcgtggacttgccgtt
gagtcctacactggaacctgcgtctttgtgggaatcggccaggcgtgttgcacccacgcc
agttctttcgacatggggcccctcctgcccccactttccggtgtactggacacgcacgct
tttttacaaaacctaccttccaccgtcgtggtacacgcactgaatcctcaacccggcgat
acaatcctcgatctctgtgccgctccaggtggcaaagcctcgcacgtggcgagtttcaca
aaaaatcaggccgtgatcttggccgctgatcggagtcggtccaaggtcgtcgccatgaaa
caacgcttcctggcactaggatgtaccagtatcgtacccttgcatcttaacgcaactgca
tgctgtatggacgagcccgggcggcctcgctgcagcgtggccgagatccgcgccgcggcc
aaagtctcggagagggacggactcttgaacgtgaaatactttttcccgggatcgttcgat
cgtattttgttggatccaccctgcagcgctttgggtctacgccccaaactgcagattgga
ccgacccgggtggacgatctgctcgcttttgccacatatcagcgcaaatttgtcccaccg
gcagtggccttgctgaaaccgggtggtattctgacttacagagaatga
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