Phaeodactylum tricornutum: PHATRDRAFT_47393
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Entry
PHATRDRAFT_47393 CDS
T01075
Name
(RefSeq) hypothetical protein
KO
K14309
nuclear pore complex protein Nup93
Organism
pti
Phaeodactylum tricornutum
Pathway
pti03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pti00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
PHATRDRAFT_47393
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pti03019
]
PHATRDRAFT_47393
Messenger RNA biogenesis [BR:
pti03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
PHATRDRAFT_47393
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nic96
Motif
Other DBs
NCBI-GeneID:
7202537
NCBI-ProteinID:
XP_002181573
JGI:
47393
UniProt:
B7G383
LinkDB
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Position
13:516133..518673
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AA seq
829 aa
AA seq
DB search
MATMEWNDLSSQTLPSLSGTSGSAWGYPSSSSNGNVANASDRVSRPAGNATGSLFSSPKK
PRWNDDHDDTMDFVEGERRHSPIESLEDCLARHQQEMFTKLLQETHEETRRVTNERIQAQ
LNAAWDREQEVWIQELVGQRSLGGSSEQNRLALQSPQYSTSQSLVAVDTTRGNAVGASPF
NHAFTSLHATTQDTAPPDSRLVQLHLEVVRLLGKESSPPQAAAKLERSIEATTPALSGYV
TALQLVQQLIPKTTSQHAPIQHAVATLVHLCHQFRTIIVHRVRKAALAGQHAITTSYRTD
LATQASAFTQISLTMDDSSPWPILYYCLRCGDAVAALEVLDSAGLASETTNLFRRVLSTL
ASMQENSDNASCFWQSGGLPRVALADRQALAGQFDRALNDFAKGVYALLSGLNNLPTSET
IIGFMNIEDYLTGLLWKALMQENADEELISVANLIQEFGPAHFGDNESGGWSYAMPLMVT
QQYSQALSHLANTGSSMGLLQASHLGLILSTCGVYDLEMPSRSTNADQRHSLDDVAAALM
TAYGDTLVMDPATGALGALEYLARIPSKVRARKEVAALIAKTGEIEQLVGQIDREGIRVG
GTLDMHFTATDISFLLDESAGILTRDRSNRQNVGSAAMCYLLAGRYANVLELLNQLISPA
RGLDDNLLFWIQQTKSFHDNYLDKPTHVGEVLEEQGKQGLIQTSRILLELNNFFHKIQEK
RFNEAMTIVSKLGLVPDSQADVNTKGSDFHRLDRLVQQCYPEVLLGVMESLRFEHRQIQL
DQQGGSSAVSRQRLLEIQGKARFIVTLAGLVGLVNDKVQDLSRLEALMI
NT seq
2490 nt
NT seq
+upstream
nt +downstream
nt
atggctacgatggaatggaatgatttgtctagtcagactctcccaagtctgtcagggaca
tcgggatcggcatggggctatccgtcgtcatcctccaacggcaacgttgccaacgcctcg
gatcgtgtctcaagacctgcagggaacgccaccggttccctgttttcctcgccgaagaag
ccacgatggaatgatgatcacgacgatactatggacttcgtagaaggggaaaggcggcat
tcaccaatcgagagcctcgaagattgcctcgcacgacaccagcaagaaatgtttaccaag
ttgctgcaggaaacacacgaggaaactcgtcgtgttactaacgaacgtatccaagctcag
ctgaacgctgcatgggaccgggagcaagaggtttggattcaggaacttgtgggacaacgg
agtttgggtggttcttcggaacagaatcgattggcccttcagtcgccgcagtattcgact
agccagagtcttgttgctgttgatacaacccgcggcaatgctgtgggtgcgtccccattc
aaccatgcattcacatcgctccatgctacgacgcaagacacagcgccgcccgattctcga
ctggttcaactgcatctggaggtagtccgtttgctcggaaaggaaagttcgcctccgcaa
gccgcagcgaagctggaacggtcgatcgaagccaccactccagcgctgtcaggatatgtg
acagcgttgcaactcgtacaacagctcattcctaaaacaacttcgcagcacgctcccatt
caacatgctgtggctactttggtacatttgtgtcaccaattccgcaccattatcgttcat
cgcgtacgcaaagccgcattggccggacagcatgccatcaccacatcctaccggacggac
cttgcaacacaggcatccgcgtttacccaaatttcattaacgatggacgacagcagtccc
tggcctatcctgtattactgtctgcgttgcggtgatgctgttgccgcgttggaagtactg
gattccgcagggctggcatcggaaacgacaaacctatttcgtcgtgtgctttccactttg
gccagtatgcaagagaacagcgacaatgcttcgtgcttctggcagtccggaggtctccct
cgtgtagctctcgcggaccgtcaagctttggccgggcagtttgatcgggctttgaacgat
tttgccaaaggagtttacgccttgctctcgggattgaataatctaccaacctcggaaaca
atcatagggtttatgaatattgaggactacttgacggggctcttatggaaggcattgatg
caagaaaatgctgacgaggagcttatcagtgtggccaatttgatccaagagtttgggcca
gcgcactttggcgataacgaatcgggcggttggtcctatgccatgccattgatggtcaca
cagcagtacagccaagctctatcgcacttggctaatactggttcttccatgggacttttg
caagcttcacacctggggctcattctgtcgacttgcggcgtgtacgacttggagatgccg
tcaaggtcgacgaatgcggatcaaagacactctttggacgacgtggccgccgctctgatg
actgcctacggagatactctcgtgatggaccccgctacgggcgcgttaggtgcacttgaa
tacttggcaaggatcccgagtaaagtacgggcccgtaaggaagttgccgccttgattgcg
aagactggtgaaatagaacaactggttggccaaatcgatcgcgaaggtatacgtgtaggt
ggcaccttggacatgcacttcaccgccactgatatttcgttcttgctagatgagtcggct
ggaattctgactcgggatcgtagcaatcgacaaaacgttggttcggctgcaatgtgctat
cttttggcgggccgatacgccaatgtgttggagctcttgaatcagctcatttcgccagca
cgtggacttgacgacaaccttcttttctggattcaacaaaccaagtctttccacgacaac
taccttgataagccaacacatgttggtgaagtgcttgaggaacaaggcaagcaaggcctg
atccaaacaagtcgcatccttttggagctgaacaatttttttcacaagattcaagagaag
cgctttaacgaggcaatgactattgtatcgaagctcggtctagtgccagattctcaagca
gatgtgaataccaaaggaagcgactttcatcgcctcgatcgcctagttcagcagtgctat
cccgaagttttgcttggagtcatggagtcccttcgatttgaacaccgtcaaatacagttg
gatcaacagggtggatcttccgccgtatctcgtcaacgattactagaaattcagggtaag
gcgcgtttcattgtgactttggctggattggttggacttgtcaatgataaggtgcaagat
ctttcacggctggaagctctcatgatctga
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