KEGG   Phaeodactylum tricornutum: PHATRDRAFT_47393
Entry
PHATRDRAFT_47393  CDS       T01075                                 
Name
(RefSeq) hypothetical protein
  KO
K14309  nuclear pore complex protein Nup93
Organism
pti  Phaeodactylum tricornutum
Pathway
pti03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:pti00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    PHATRDRAFT_47393
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pti03019]
    PHATRDRAFT_47393
Messenger RNA biogenesis [BR:pti03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     PHATRDRAFT_47393
SSDB
Motif
Pfam: Nic96
Other DBs
NCBI-GeneID: 7202537
NCBI-ProteinID: XP_002181573
JGI: 47393
UniProt: B7G383
LinkDB
Position
13:516133..518673
AA seq 829 aa
MATMEWNDLSSQTLPSLSGTSGSAWGYPSSSSNGNVANASDRVSRPAGNATGSLFSSPKK
PRWNDDHDDTMDFVEGERRHSPIESLEDCLARHQQEMFTKLLQETHEETRRVTNERIQAQ
LNAAWDREQEVWIQELVGQRSLGGSSEQNRLALQSPQYSTSQSLVAVDTTRGNAVGASPF
NHAFTSLHATTQDTAPPDSRLVQLHLEVVRLLGKESSPPQAAAKLERSIEATTPALSGYV
TALQLVQQLIPKTTSQHAPIQHAVATLVHLCHQFRTIIVHRVRKAALAGQHAITTSYRTD
LATQASAFTQISLTMDDSSPWPILYYCLRCGDAVAALEVLDSAGLASETTNLFRRVLSTL
ASMQENSDNASCFWQSGGLPRVALADRQALAGQFDRALNDFAKGVYALLSGLNNLPTSET
IIGFMNIEDYLTGLLWKALMQENADEELISVANLIQEFGPAHFGDNESGGWSYAMPLMVT
QQYSQALSHLANTGSSMGLLQASHLGLILSTCGVYDLEMPSRSTNADQRHSLDDVAAALM
TAYGDTLVMDPATGALGALEYLARIPSKVRARKEVAALIAKTGEIEQLVGQIDREGIRVG
GTLDMHFTATDISFLLDESAGILTRDRSNRQNVGSAAMCYLLAGRYANVLELLNQLISPA
RGLDDNLLFWIQQTKSFHDNYLDKPTHVGEVLEEQGKQGLIQTSRILLELNNFFHKIQEK
RFNEAMTIVSKLGLVPDSQADVNTKGSDFHRLDRLVQQCYPEVLLGVMESLRFEHRQIQL
DQQGGSSAVSRQRLLEIQGKARFIVTLAGLVGLVNDKVQDLSRLEALMI
NT seq 2490 nt   +upstreamnt  +downstreamnt
atggctacgatggaatggaatgatttgtctagtcagactctcccaagtctgtcagggaca
tcgggatcggcatggggctatccgtcgtcatcctccaacggcaacgttgccaacgcctcg
gatcgtgtctcaagacctgcagggaacgccaccggttccctgttttcctcgccgaagaag
ccacgatggaatgatgatcacgacgatactatggacttcgtagaaggggaaaggcggcat
tcaccaatcgagagcctcgaagattgcctcgcacgacaccagcaagaaatgtttaccaag
ttgctgcaggaaacacacgaggaaactcgtcgtgttactaacgaacgtatccaagctcag
ctgaacgctgcatgggaccgggagcaagaggtttggattcaggaacttgtgggacaacgg
agtttgggtggttcttcggaacagaatcgattggcccttcagtcgccgcagtattcgact
agccagagtcttgttgctgttgatacaacccgcggcaatgctgtgggtgcgtccccattc
aaccatgcattcacatcgctccatgctacgacgcaagacacagcgccgcccgattctcga
ctggttcaactgcatctggaggtagtccgtttgctcggaaaggaaagttcgcctccgcaa
gccgcagcgaagctggaacggtcgatcgaagccaccactccagcgctgtcaggatatgtg
acagcgttgcaactcgtacaacagctcattcctaaaacaacttcgcagcacgctcccatt
caacatgctgtggctactttggtacatttgtgtcaccaattccgcaccattatcgttcat
cgcgtacgcaaagccgcattggccggacagcatgccatcaccacatcctaccggacggac
cttgcaacacaggcatccgcgtttacccaaatttcattaacgatggacgacagcagtccc
tggcctatcctgtattactgtctgcgttgcggtgatgctgttgccgcgttggaagtactg
gattccgcagggctggcatcggaaacgacaaacctatttcgtcgtgtgctttccactttg
gccagtatgcaagagaacagcgacaatgcttcgtgcttctggcagtccggaggtctccct
cgtgtagctctcgcggaccgtcaagctttggccgggcagtttgatcgggctttgaacgat
tttgccaaaggagtttacgccttgctctcgggattgaataatctaccaacctcggaaaca
atcatagggtttatgaatattgaggactacttgacggggctcttatggaaggcattgatg
caagaaaatgctgacgaggagcttatcagtgtggccaatttgatccaagagtttgggcca
gcgcactttggcgataacgaatcgggcggttggtcctatgccatgccattgatggtcaca
cagcagtacagccaagctctatcgcacttggctaatactggttcttccatgggacttttg
caagcttcacacctggggctcattctgtcgacttgcggcgtgtacgacttggagatgccg
tcaaggtcgacgaatgcggatcaaagacactctttggacgacgtggccgccgctctgatg
actgcctacggagatactctcgtgatggaccccgctacgggcgcgttaggtgcacttgaa
tacttggcaaggatcccgagtaaagtacgggcccgtaaggaagttgccgccttgattgcg
aagactggtgaaatagaacaactggttggccaaatcgatcgcgaaggtatacgtgtaggt
ggcaccttggacatgcacttcaccgccactgatatttcgttcttgctagatgagtcggct
ggaattctgactcgggatcgtagcaatcgacaaaacgttggttcggctgcaatgtgctat
cttttggcgggccgatacgccaatgtgttggagctcttgaatcagctcatttcgccagca
cgtggacttgacgacaaccttcttttctggattcaacaaaccaagtctttccacgacaac
taccttgataagccaacacatgttggtgaagtgcttgaggaacaaggcaagcaaggcctg
atccaaacaagtcgcatccttttggagctgaacaatttttttcacaagattcaagagaag
cgctttaacgaggcaatgactattgtatcgaagctcggtctagtgccagattctcaagca
gatgtgaataccaaaggaagcgactttcatcgcctcgatcgcctagttcagcagtgctat
cccgaagttttgcttggagtcatggagtcccttcgatttgaacaccgtcaaatacagttg
gatcaacagggtggatcttccgccgtatctcgtcaacgattactagaaattcagggtaag
gcgcgtttcattgtgactttggctggattggttggacttgtcaatgataaggtgcaagat
ctttcacggctggaagctctcatgatctga

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