Phaeodactylum tricornutum: PHATRDRAFT_47468
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Entry
PHATRDRAFT_47468 CDS
T01075
Name
(RefSeq) hypothetical protein
KO
K15446
tRNA:m4X modification enzyme [EC:
2.1.1.225
]
Organism
pti
Phaeodactylum tricornutum
Brite
KEGG Orthology (KO) [BR:
pti00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pti03016
]
PHATRDRAFT_47468
Enzymes [BR:
pti01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.225 tRNA:m4X modification enzyme
PHATRDRAFT_47468
Transfer RNA biogenesis [BR:
pti03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
PHATRDRAFT_47468
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GFIT
Motif
Pfam:
TRM13
zf-TRM13_CCCH
zf-U11-48K
Motif
Other DBs
NCBI-GeneID:
7202584
NCBI-ProteinID:
XP_002181789
JGI:
47468
UniProt:
B7G3H2
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Position
13:complement(705787..707403)
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AA seq
538 aa
AA seq
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MGEPTDLPLVSQIPPLPKEWARCHAYIDNKRRYCRQHPIEFEDAPATDHKADTGRPRYCG
NHQHLLANRKRKRIPCPADASHSVYEDCVAKHLSVCPMLKKQRGQEKQSFYRKNINTGGY
GPLGEIEEIATSQIRSKLDHEMSQFAESVLRLHQKLFAGDNIQDPSVLSAEDIHQAIPTE
DLSSAEFDAGLAQAVSDYRIKSGGQKHLHQQASLVGHLRRIGALPSLSKGSRHTDKIKSV
GKHLILEVGAGRGMTGLVAAGVSVVHGDPTDLIMIERAGSRGKADTVLRNAPICVKQTTS
DVPPYLDLKGPLSWSRVQCDLSHLSLSSILLNADLEENDRVTVLAKHLCGAGTDLALKAL
EPVKTSISSCILATCCHGVCNWQDYVGRKFLVDAFQKNCPSQPFGAFEFELLRRWSTGTV
KAGAAENRLGENRIEIADSSLQEHGLGTVLVENASANISRIVEASRLRCGAQGLGRACQR
LIDYGRQEYLRGVLFPSAKHANGSVETTNIDMLHYVAPGVTPQNAALVAFSEKTGHIP
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atgggagagcctaccgatttgcccttggtaagccaaattccaccattaccaaaagaatgg
gctcgatgccacgcctacattgataataagcggcgatattgccgacaacatcctatcgaa
ttcgaagacgcgccggcaacggatcacaaagctgataccggcagacctcgctactgcggc
aaccaccaacatcttctggccaatcgcaaacgaaaacgtataccctgtccagccgatgca
tctcactccgtatacgaagattgcgtagccaagcacctgtccgtctgtccaatgctgaag
aaacagagagggcaggagaagcaatctttctaccggaagaatataaatacaggtggttac
ggccccttgggcgagatcgaagaaatcgctaccagccaaatacggtcaaagttggatcat
gaaatgagtcaattcgctgaatccgtattaaggttacatcagaaattgtttgccggcgac
aatattcaagacccatcggtcctctccgctgaggatattcatcaagcgatacctacggag
gatctatcctctgcagaatttgacgcaggcttagcccaggcagtttccgactatcggatt
aagtcgggtgggcaaaagcatttgcaccagcaagccagcctcgtgggacacttgcgccgt
atcggggcgctgccatcgctttccaaagggtcacgccatacagacaaaatcaagtcagtc
gggaaacacttgatcttggaagtcggtgcgggtcgtgggatgaccggcttggtcgctgcc
ggtgtttctgtagtccacggtgacccaacagatctaatcatgattgaacgcgctggatcc
cgaggcaaggccgatactgtgctgcgcaatgccccaatatgtgtcaaacagaccacgtcg
gatgtcccaccgtatttggatctcaaagggcctctatcctggtcgcgtgtgcaatgcgat
ctttcccatctcagcttgtcatccatccttttgaatgcagatttagaagagaacgaccgt
gttacggtgttggcgaagcatttatgcggtgccggcacagacctggctctgaaggcgttg
gaaccagtaaagacgtcgatttcctcctgtattttggcaacatgctgtcatggagtttgt
aactggcaagattacgtcggaagaaagttcttagtggacgctttccagaaaaactgcccg
tcacaaccgttcggagccttcgagtttgagctacttcggcgatggagcaccggcacagtc
aaggcaggggcggcagagaatcgccttggcgaaaaccgcatagaaatcgctgattccagc
cttcaagagcatggtctcggcaccgtcttggtcgagaatgcatctgctaatatttccaga
attgtggaagcgagccgtctacgatgcggagcccagggtctgggccgcgcctgtcagcgt
ctcatcgattacggacggcaggaatatctccgtggggttctgtttccttccgcgaaacat
gcaaatggatcagtcgagacgacaaacattgacatgctgcactatgttgctcccggtgtt
actcctcaaaatgctgcactggtagcattttccgaaaagacaggccatataccatga
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