KEGG   Phaeodactylum tricornutum: PHATRDRAFT_47526
Entry
PHATRDRAFT_47526  CDS       T01075                                 
Name
(RefSeq) hypothetical protein
  KO
K14546  U3 small nucleolar RNA-associated protein 5
Organism
pti  Phaeodactylum tricornutum
Pathway
pti03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:pti00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    PHATRDRAFT_47526
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:pti03009]
    PHATRDRAFT_47526
Ribosome biogenesis [BR:pti03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    PHATRDRAFT_47526
SSDB
Motif
Pfam: Utp12 Beta-prop_VPS8 Utp21
Other DBs
NCBI-GeneID: 7202769
NCBI-ProteinID: XP_002181826
JGI: 47526
UniProt: B7G3Z5
LinkDB
Position
14:19302..21420
AA seq 594 aa
MAPVVAALSANGDLVAAALPSASPSSSSSALRVLVFQTATAQLQTTLATSSKKLADSSTS
QHQVIRAITFGNQNTLVAALTENAQSHTALHRSGGGAVLVWDLTRGVLAYEIPTAQSVDQ
SILSIALYDSHLYVLLSLHSGTSKNKSNANSKLQIHQYDAVTGVLQRKIKAGKQGSAHGC
SLAVTEGTLLVRQADVVRVLHRHTASKIAKLSVGSVGNDDVDDTNRSLVNSIAAARNVGA
TLAGDQMVLFHSLTGAKFVKQDLPSHADRTGLQVWDSTNTEADGKDSDEVAFVTDGVDIY
RIRNSDDSSTGSSRVEKVTRLVVDANQDRNDTAVLGWQNQVIVVVANRQQKSNAASLQIR
RHNLVDEIVIAWQTPEFDKDITMKDPSMSLAASKRKADMQTVLGPAQAGGEAKAIDGPIP
KRTKMDEEEEEEEGGIEGPSVGERLRLLRQALEKEEESDDDDNDDDTEKSKISYPPKKAT
TESLTQLLTQALQSGDDSMLELALSVRDTNILQETCQQLADEHLPTLLNALTSRLASKPA
RAEFLCVWIRVVLLTGRIRSAGHLQPLRNLLQERIEVFPALLQLEGRLSMMGRL
NT seq 1785 nt   +upstreamnt  +downstreamnt
atggcaccagtcgtagcggcactttcggccaatggcgatttagtggcggctgcgctgccg
tcggcgtcgccctcgtcttcctcctcggcattgcgggtgctcgtcttccaaaccgccacg
gcgcagctgcaaacgacgctcgctacatcatccaagaaattagcagacagcagtactagt
cagcatcaagttatccgggcgattacctttggtaaccaaaacacgctggtggcggccttg
acggagaacgcccaaagccataccgccctccatcgatccggtggaggagctgtactggtt
tgggatctgacacgcggcgtgttggcctacgaaatacccacagctcaatcagtggaccaa
agcatcctcagcatcgcgctgtacgattctcatttatatgtgttgctatccttgcacagc
ggaaccagcaagaataagtccaacgccaacagtaaactacagattcatcaatacgatgct
gtcacgggagttttgcaacggaaaatcaaagccggaaaacaaggatcagcccacggttgt
tccttggccgttaccgagggcacactcttggtccgacaggccgatgtcgtccgggtcttg
catcgacacacggcgagcaaaattgccaaactctcagtgggatcagtgggaaacgacgat
gtcgatgataccaaccgcagtctcgtcaattctattgcagcggctcgcaacgtcggtgcc
acactcgctggggatcaaatggtgcttttccattccctgactggagccaagtttgtcaaa
caagatctgccgtcgcacgcggaccgtacaggcttgcaagtttgggactctaccaatact
gaagccgatggaaaggacagtgacgaggttgcgtttgtgaccgatggggttgacatttat
cgtatccgtaacagtgacgattcctcgaccggctcgtctcgggtggagaaggtcaccaga
ctcgtcgttgacgcgaaccaagatcgcaacgataccgcagtattgggatggcagaaccag
gtaattgtggtcgttgccaaccggcaacaaaagagcaatgcagcttccttgcagattcga
cgacacaatctcgtcgacgagattgtgatagcgtggcagacccccgaattcgataaggat
atcacaatgaaagacccgagcatgtcgctggccgccagtaagcgtaaagcagacatgcag
actgttctaggacccgcccaagcgggaggcgaagcaaaagcgatcgatggtccgataccg
aagcgaactaaaatggacgaggaagaagaagaggaagaagggggaatagagggaccttct
gtaggcgaacgacttaggctgctgcgccaagcacttgaaaaggaagaggaaagcgatgat
gatgacaacgatgacgacacggaaaagtcaaaaatctcctacccgccgaagaaggccacg
accgagtcgttgacacagttgttaacgcaagcgttgcaatctggcgatgactccatgtta
gagttggccttgtctgtacgcgacaccaatatactacaggaaacctgtcagcaacttgcg
gacgagcacttgccaactttgttgaatgcactgacatctagactcgcatcgaagccagct
cgcgccgaatttctctgcgtttggatacgggtagtactattgacgggtcggattcgatcg
gccgggcatttgcagccgctgcggaatttgctacaggaacgcatcgaagtatttccggcc
ctcttgcagctcgaaggccgattgagtatgatggggaggttataa

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