Phaeodactylum tricornutum: PHATRDRAFT_47826
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Entry
PHATRDRAFT_47826 CDS
T01075
Name
(RefSeq) hypothetical protein
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
pti
Phaeodactylum tricornutum
Pathway
pti03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pti00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
PHATRDRAFT_47826
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pti03019
]
PHATRDRAFT_47826
Enzymes [BR:
pti01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
PHATRDRAFT_47826
Messenger RNA biogenesis [BR:
pti03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
PHATRDRAFT_47826
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAP_central
PAP_NTPase
PAP_RNA-bind
NTP_transf_2
MTPAP-like_central
Motif
Other DBs
NCBI-GeneID:
7202969
NCBI-ProteinID:
XP_002182338
JGI:
47826
UniProt:
B7G519
LinkDB
All DBs
Position
15:complement(171547..174269)
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AA seq
777 aa
AA seq
DB search
MTGSYSPSVTSPASVAGTGSPIHAAMSIPNTSCNSSVGSSQHSSTSEDGNNSRTSSRASH
RSRRRRNRRLALQKTTQGEESSSGSLLQQQQQELHNGVESARFRQIWKDSFPAHPQEERV
RRDAMDDLTRLLAQWAGTLAASVMTSTSGMSRDQLSVYPTIVPFGSYRLGVHRPGSSDLD
VLVIAPPHCSRNEFFTSFVELLSTPANGSQNTFTQIHAIPTAYTPVLKCQYASSLPMDML
FVSVADPTKLIAWRQQSSMKADSRMTLPQHLPPWQPGVDAEAGAGGSIYPKFEEPHTNEQ
ASTTTTTALYYRIDDSDLCDQDPAGVRSLNGARVTQTLLDLVIPVGLERFQMVLLMVKAW
ARAQGVYSNVLGFWGGVNWAILVAYVCRAYPESSIADTVQLFFETFANWKWPTPVSLIDL
NDASITTPPPGAAVLPSWNPAIHIRDGLHVCPILTPAYPVMNSSYNVALPQLRRMTEALQ
YTAHKIARWVDRSHTTYNRGVPVRRKIPWHRLWSLNAGWVFRHQHYVHATIRAPQGEAFV
TWFRLVESRLRVLISSLETPDSHAWPHGRFFYRNVPIAPYDELNGLREAHFFIGLRFASH
VDTADVRTLTLDFLRQVNGWIGRDSSMDLSLGHVTLPNLPRFVLDEIAQEDQQQQLLQHQ
TPVIRKKYHETSPAALTQNETAVPSKENESPVLNAATAASVSTPGPPPLRDLVSPAKKGR
FGSISTDGDAATEASFEDEYAAEDAYDTRALLAEATSTAPVTQHSTCTLQEGLEHWS
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
atgacgggatcatattccccgtccgtcacttctcccgcctccgttgccggtaccggaagt
cctatccacgccgcaatgtcgatcccaaatacttcctgtaatagttccgttggcagtagt
caacacagcagtacgagtgaagacgggaacaacagtcgaacttcttcccgtgccagtcac
cggagtcgtcgtcgaagaaatcgacgtttggcgctacaaaagaccacacaaggagaggaa
tcttcctccggctcgttgttacaacaacaacaacaagaactccacaatggtgtggaaagc
gcacgctttcggcaaatctggaaggatagttttccagcccatccacaggaggaacgtgtg
cgtcgagacgctatggatgacctgactcgactactcgctcagtgggcgggaacactagcc
gcttcggtaatgacctcgactagtggtatgtcgcgggatcaactctcagtctatccgaca
atcgttccctttggatcgtaccgtctgggggtgcaccgaccgggatcttccgatctagac
gttctcgtaatcgcgccaccacactgttcccgcaacgaattctttaccagtttcgtggaa
ctcctgtccacccccgctaacggtagccaaaatacctttacccagattcacgccattccc
accgcgtacactcccgtgctcaagtgccagtacgcgtcctcgctacccatggatatgttg
tttgtcagtgtggccgatcccacgaaactcatcgcctggcgtcagcaatcatcaatgaag
gccgactcgcggatgacccttccgcaacacttgcccccgtggcagccgggagttgacgcg
gaagcaggcgctggtggttccatttaccccaaatttgaagagccacacaccaatgaacaa
gcatcgacaacaacaacaacagctctatactaccgtattgacgattccgacttgtgtgat
caagatcctgcgggagtccgctccctcaatggcgcacgggttacgcaaacactgctagat
ctagttataccagtaggtttggaacgtttccaaatggtgctgcttatggtcaaggcctgg
gctcgagctcagggtgtttacagtaatgtactgggcttttggggcggggtcaattgggca
atacttgtcgcctacgtgtgtcgagcatatccagaatcttccatcgctgataccgtgcaa
ctcttttttgagacattcgcgaactggaagtggcctacgcccgtgagcttgattgatctg
aacgacgctagtatcacgacgccgccgccgggtgccgctgtgttgccgtcttggaatccc
gctatccacattcgggacggtctccacgtatgtcccatcctgactccggcttatcccgtt
atgaactcatcctacaacgtagccttgccgcaactccgtcggatgacggaagctttgcaa
tacactgcccataagattgctcgttgggtggatcgatcacacaccacgtacaatcgggga
gttcccgtccgacgcaaaattccgtggcatcgactatggagcctcaatgcgggctgggtc
tttcggcatcagcattacgtccacgcaacgatacgtgccccgcaaggagaggcctttgtg
acgtggttccgtctcgtagaaagtcgtctccgcgtactgatttcgagtttggaaacgccg
gactcgcatgcgtggccccacggtcgattcttttaccgcaacgtcccaatcgctccatac
gatgaactgaatggacttcgtgaagcgcactttttcatcggactgcgtttcgcctctcac
gtggacacggcggatgtccggaccttgacattggattttttgcgacaggtcaacggttgg
attggtcgggacagttcgatggatctgagtctagggcacgtgaccttgccaaacttgccc
cgatttgtcttggatgaaatcgctcaagaagaccaacagcagcaattgctacaacatcaa
acgccggttatccgcaagaagtaccatgaaaccagtcccgctgcgttgacgcaaaacgaa
accgcggtgcccagtaaagaaaacgaatcacccgtcctcaacgctgcgacggctgccagt
gtgtctactcctggaccccctccgttgcgcgatttggtgtcgccggcgaaaaagggtcgc
tttggcagcattagtactgatggagatgcggcaactgaagccagtttcgaggacgaatac
gcagccgaagacgcttacgacacccgagcactattggcagaggcgacttccaccgctcct
gtaacacaacacagcacctgtacgttacaagaaggtctcgagcactggtcctga
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