Phaeodactylum tricornutum: PHATRDRAFT_47896 Help Entry PHATRDRAFT_47896  CDS       T01075                                  Name (RefSeq) hypothetical protein   KO K12600   superkiller protein 3 Organism pti  Phaeodactylum tricornutum Pathway pti03018   RNA degradation Brite KEGG Orthology (KO) [BR:pti00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     PHATRDRAFT_47896  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:pti03019]     PHATRDRAFT_47896 Messenger RNA biogenesis [BR:pti03019]  Eukaryotic type   mRNA degradation factors    3'-5' decay     Ski complex      PHATRDRAFT_47896 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  TPR_2 TPR_11 TPR_19 TPR_8 TPR_17 TPR_1 TPR_7 TPR_14 TPR_12 ANAPC3 TPR_9 Motif Other DBs NCBI-GeneID:  7203162 NCBI-ProteinID:  XP_002182211 JGI:  47896 UniProt:  B7G5A4 LinkDB All DBs Position 15:377288..381995 Genome browser AA seq 1543 aa AA seqDB search MLASAPKVKAYLASLKGSVIDSEKPDFILCYTALLKLELLHRGVLLDSTNDLSKTLDSVT VTAGKALLDSSIASMPKTLLSGISAFAGRIAENVNTAVMDSGTYLNELSELDGERSQSAR QRCRDVGDKRLYAILLIASERKLLTNVQLSERLLFLAEGYYYHAASLQPDAPIMWKRAWD TIVERQKINGKNDENSWEATFSLQNLRRIASYKGNGKRAAELGLALVQSLLNSVDCTESN VSLKGLLESFVQPYRELEPMKRKYANKMAADTVESISEESLSELDLFLLKQLSLRVCLSG EDWAIEQIAEDEIKQRENRKPLEAVIKPLSLEAVRGLVRKDYLANQDSFSEKMDKFANAL RDAVLLNFADSKARINGCIDLLKYLSRMKDKYQARAYTLALGSTERCVTLEDIANFVKPI LYALRERAAWSGIDESAEERIHRLEKCFNDVSVEELGYIEACALIVPFLEWKFSCSDSVV MLFDMESHCFVQELLWMLRRKWKAVAEHSQTTATVKNQVDKTDRRIQKIDLALLSTMALL ALGLPSGSTSDVRRVTDAAISFSIKDVSQYSSESGGPFLSFLVAWNGLSRSPWQFCGVAE ARRILVGARACLLKSARACGQTFLSVGSLLLDIAKADAEMLSIGGGLTHEVPLLYRAVMT AAKDTGRMADNLELILQSHIFSGWGRLLIREPALQFEAVNAQENVVDVLKGYLIALQRMD CEGSFYLWRSPSAVRNAACYQIAAARQRIADLLLHKGELEEAQFFLQDAVNDAPEDQNAC FSLGVFQLRLMCCEQSRLPVDEKAAQMHLLRAAKLDSSRPDPFALLGYWYEESNDYKRAA GCYSKALLLDPSHPVAGRGLLRLKAGNLLGVLEKAIDRGSTLSGWAWLALATHKANVLGD DELAVVSLVNALRCRDILNPESEPLAFCYYDPLGPRDSSCSDHATALCALGSSYERLGRY TAALRSFHSAIDESSLHVTTASLISCAQVEIKLGLFEDAAERLTTVVSTENKDERLVAAQ NLGIALHALAQRDLHDGKAGAALSHIVRGIEFLQSQLESHVCLQKLIGDLYTYAAVLPPD LFESTFSNSSSISPNGQLSPHYQFIAAGEEFYNIAISNATDLFKEGDELKHLQASLISDL GCNILLQAQSCFSAHVHGVTSPSRKEVLLTSAATKFKSALEIDPLHSPAWCGLGCALAVS DPLLAQHAFSRAIELDKVSPDAYANLGFLYTSNARLAASAGVSDALTEVADTPMMWINRA IVLEYQARQSHQQEEEQQYRGYIREASNAYLASMQVVKRPAAVLGMSLLSRIDWGNPEAP YAQRESSYYLDEYLASVGPADLPAKILQRVAFLEKSASSHRSTSPAELSAMISGVTDATS DLKAIGIGSEAGQGLDLDLISGIGADVATEHSEEGTACELSLPIPIGRRLMLTPRDGSVW LELSKELVFALSNDSPDCSFDAARSAAVQSLNILMRSVFHTSYVMSKPAKYKAADVSDAL SLAHVLKNKAQNEWYSSSGHDFDLQRALILCPTNKVARAALTN NT seq 4632 nt NT seq  +upstreamnt  +downstreamnt atgttggcgtcggcccctaaagtgaaggcctacttggctagtctgaaaggaagcgttata gattccgaaaaaccagactttatactctgttatacagcgcttctcaaacttgaactgctt cataggggagtattgctcgactcaacaaatgatctatccaaaacgctggactccgtgacg gtcacggccgggaaagcactgctagactcatctatcgcatccatgccgaaaacactctta tcgggtatttcggcattcgctggcagaatagctgaaaatgtgaatactgctgtgatggat tcagggacatatttaaatgagttatctgagctggacggggaacgtagtcaatccgcacgc caacgttgtcgcgatgtgggcgataaacgactttacgcaatcttactcatcgctagcgag agaaagctactaacgaatgtccaactctctgagcgattattgtttctcgcagaaggttac tactatcatgccgcaagtttgcaaccagatgctcctattatgtggaaaagggcctgggat accatcgttgaaagacaaaagattaatggcaagaatgatgaaaactcctgggaggcgaca ttttcacttcaaaatctacgccgtatcgcctcatacaaagggaacggtaagcgcgcggca gaattgggtttagctctcgtgcagagtctcctcaattctgttgactgtaccgaaagcaac gtatctctcaagggccttctcgaatcatttgtgcagccttatcgggaactggaaccaatg aaacgcaagtatgcaaacaagatggctgctgatactgtagagtccatatctgaggaaagt ctatcagaactggacctttttcttctaaaacaactgtctctaagggtttgcttgtctggc gaagattgggcaattgaacaaatagcagaggacgaaatcaagcaacgagagaatcgtaaa ccccttgaagcagtaatcaaacccttatctttggaagctgtacgtggccttgtaagaaag gattatttggcgaaccaagattctttctctgagaagatggataagtttgcaaatgctcta cgcgacgctgtcttactgaattttgcagattctaaagcacgcattaatggctgtattgac ctattgaagtatttgtcgcggatgaaggacaagtaccaggctagagcttatacattggca ttaggctcgacagaacgatgtgttacattggaagatatcgcgaacttcgttaagcctatc ttgtacgccttgcgagaacgagccgcttggagtggaatcgatgagagtgcggaagaaagg atacataggttagagaaatgcttcaatgatgtgtccgtagaagaattgggatatatcgag gcatgcgctttgatagtcccatttttagaatggaaattttcttgctcagattctgttgtg atgctatttgacatggaatctcattgctttgttcaagaacttctttggatgcttcgtaga aaatggaaggctgtcgccgaacattcccagacgactgctacagtgaagaatcaagtagat aaaacggatcgacgcattcaaaagatcgacttggcacttttgtcgacgatggctctcctc gctctggggttgccttcaggttccacctctgatgttcgacgtgtgacggatgcggcaatc tctttttcaatcaaagatgtcagccaatattcaagtgagagtggtggtccgtttctctct ttccttgtcgcctggaatggtctatctcgatcgccctggcaattttgcggagttgccgaa gctcgccgaatactagtcggtgcaagagcgtgcttactgaagtcggcaagagcttgcggt caaacattcttgtcggttggttcactgctccttgacatcgccaaggcagatgcggaaatg ctgtctattggaggagggttgactcatgaagtgccactcctttacagagccgtaatgacg gcagcaaaggacactgggagaatggcggacaacttagaacttatactgcaatcacatatt ttctcgggttgggggaggttacttatcagagaaccagccctgcagtttgaggcagtcaat gcgcaagagaatgtagtagacgtattgaaagggtacttgattgctttgcaaagaatggac tgtgaaggctctttttacttgtggcgctctccaagcgcagtgaggaacgcggcctgctat caaattgcggctgcgaggcagagaattgctgatctgctgcttcacaagggtgagctagag gaggcgcagttttttcttcaagacgcggtaaacgatgcgcctgaagatcaaaatgcatgc ttttctttgggtgtttttcaacttcgactgatgtgttgtgaacaatcgcgattgcctgtc gatgaaaaagcggcacagatgcaccttctacgagctgccaaactagattcgagtcgtccc gatcccttcgccttgctaggatattggtatgaagagtcgaacgattacaaacgggctgct ggatgctattcgaaggctttgcttcttgacccttcgcatccagtagctggtcgtggttta ttaagactgaaagctggaaacctactgggtgtgcttgagaaggcaattgataggggctcc acgctcagcggatgggcatggttggcgcttgcgacccacaaagccaacgtattgggcgac gacgagcttgccgtagtgtctctcgtgaatgctctgcgttgccgcgacattctgaaccct gaatctgagcctcttgctttctgctattatgacccattaggcccacgtgactctagctgc agcgatcacgctacggctttgtgcgctttaggttctagctacgagcgccttggtcgctat actgccgcgcttcggtcatttcattctgctattgacgaatcgtctctacacgtcaccaca gcatctctcatttcgtgtgcgcaagtcgagattaaacttgggttatttgaagacgccgca gaacgactgacaacagtcgtatctacggagaacaaggacgagcgacttgttgctgcgcaa aaccttggtatagctctgcatgcacttgcccaacgggatctccatgatggaaaggctggt gcagctctttcgcatattgtccgaggcatagagttcttgcagtcacaattggaatctcat gtctgtctacaaaaactgatcggggatctttacacctatgcggctgtgttgcctcccgac ctatttgaatcgaccttcagcaacagctcatcgattagccccaatggtcagttgagcccg cattatcaatttattgccgctggagaagaattttacaatattgcaatatcaaacgccacg gaccttttcaaagaaggcgatgaattgaagcatttgcaggccagcctgataagtgacctt ggttgtaatattcttctccaggctcaatcatgcttttcagcccatgtacacggcgttaca tctccttcaagaaaggaggtcttactcacctctgcagcgactaagtttaaaagtgctctg gaaattgaccctctacattctccagcttggtgtggacttggatgtgcgttagccgtaagc gatccccttcttgcacagcacgccttttcacgtgcaatcgaactggacaaggtcagtccc gatgcgtacgcgaacctcggtttcttgtacacatctaatgccagattagccgcgagcgcc ggggtctctgatgcgttgaccgaagtagcagacacacccatgatgtggatcaaccgagct atagttcttgagtaccaggctcggcaatctcaccagcaagaggaagaacaacaataccgt ggctatattcgggaagcttcaaatgcttaccttgcgtcaatgcaagtagtgaagcggcct gctgctgtccttggtatgtctctgttgtcccgtatcgactgggggaatcccgaggcacca tacgcccagcgcgaaagctcctattacctcgatgagtatttggcctccgttggtccagcc gacttgcctgctaaaatactacaaagagtggcctttttggagaagtcagcttcgagccat cgaagcacttctccagctgagctatcggcgatgatctccggtgttacagatgccaccagc gatctcaaggcaattggtataggtagtgaagccggacaaggtcttgacctggatttgatc agcggaataggagcagacgtggcgactgaacattcagaagaaggcacagcctgtgaattg tcgttgcctataccaattggtcgtcgcctgatgctgacaccacgggatggctccgtgtgg ttggaactttccaaagagttggtgtttgctttgagtaacgactcaccagactgctccttt gatgctgcccgatctgctgccgtgcagtcactcaacattctgatgagaagcgtgttccac acttcctatgtcatgagcaaaccagcaaagtacaaggctgccgacgtttcggacgctctg tcccttgcccacgtactgaagaataaggctcagaacgagtggtattcatcaagcggtcac gactttgatcttcagcgagcactcattttatgccccaccaacaaagttgccagagcagcg ctgaccaattag

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