Phaeodactylum tricornutum: PHATRDRAFT_48103
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Entry
PHATRDRAFT_48103 CDS
T01075
Symbol
SNAP
Name
(RefSeq) hypothetical protein
KO
K15296
alpha-soluble NSF attachment protein
Organism
pti
Phaeodactylum tricornutum
Brite
KEGG Orthology (KO) [BR:
pti00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pti04131
]
PHATRDRAFT_48103 (SNAP)
Membrane trafficking [BR:
pti04131
]
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SNARE associated proteins
Others
PHATRDRAFT_48103 (SNAP)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SNAP
NSF
TPR_IF140-IFT172
TPR-S
TPR_10
Motif
Other DBs
NCBI-GeneID:
7203269
NCBI-ProteinID:
XP_002182638
JGI:
48103
UniProt:
B7G602
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All DBs
Position
16:complement(214519..215599)
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AA seq
313 aa
AA seq
DB search
MSAIAKAQKAKGQEYQAEAGRALTKKSWFASARDRNVEDAAELYLQAANAYKVGGLNQEA
GDVYNVAGELYRDKLKQANEAAKCFTQAGSCYKKSNPVDAVSSYQSAVSLLTDAGRLTQA
AKLCKECAELYESEEVAEAGGKSNVVAAIEAYEQAGELFGMEDSKSQASQCRAKVAELCS
AALDPPDLLRAAGLYDELGRACLDSNLLKYNAKSYFLQAILCHLANGDAIGAEQALGRYE
GVDYTFAESREGKFCRQLVECVEGYDAEAFATACYEFDRISKLDPWKTSMLVKVKRSIQD
DGAGEEEDDVDLT
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgtccgccattgcgaaagcgcaaaaagccaagggccaagagtaccaggccgaggcagga
cgggcgctgacgaaaaagtcgtggtttgccagcgcgcgtgaccgcaacgtcgaggacgcc
gcggaattgtacctacaagctgccaacgcctacaaagtcggtggactcaatcaggaagct
ggtgacgtctacaatgtcgcgggtgaactttatcgtgacaagttaaagcaagccaatgaa
gcggccaagtgctttacacaagcaggctcttgctataaaaagagcaatccggtggatgct
gtttctagttatcagtccgcagtcagtctcttgacggacgccggtcgtttgacgcaggcc
gccaaactgtgcaaggaatgtgccgagctatacgagtcggaggaagtcgctgaagctggt
ggaaaatccaacgtggttgccgccattgaagcgtacgaacaagccggcgaattgtttggt
atggaagacagtaaatcgcaggcttcccaatgccgggccaaagtggcggaattatgcagt
gccgcgctcgatccgccagatctactgcgggcggcaggattgtatgatgaactcggacga
gcatgcttggactcgaatttgttaaagtacaacgcaaaatcgtactttttgcaagccatc
ttgtgtcatttggccaacggggacgcgattggggcggaacaagccttgggcagatacgaa
ggtgtggattatacgtttgctgaatcgcgagaaggcaaattttgtcgacaactagtggaa
tgcgtggaaggttacgatgcggaagcgttcgcgacggcgtgctacgaatttgatcgcatt
tccaaactcgatccttggaagacttccatgttggtaaaggtcaagcgcagtattcaggat
gacggtgccggcgaagaagaagatgatgtcgatcttacctaa
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