Phaeodactylum tricornutum: PHATRDRAFT_48547
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Entry
PHATRDRAFT_48547 CDS
T01075
Name
(RefSeq) hypothetical protein
KO
K15027
translation initiation factor 2D
Organism
pti
Phaeodactylum tricornutum
Brite
KEGG Orthology (KO) [BR:
pti00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
pti03012
]
PHATRDRAFT_48547
Translation factors [BR:
pti03012
]
Eukaryotic type
Initiation factors
eIF-2D
PHATRDRAFT_48547
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SUI1
DUF4841
Motif
Other DBs
NCBI-GeneID:
7194784
NCBI-ProteinID:
XP_002183045
JGI:
48547
UniProt:
B7G7M4
LinkDB
All DBs
Position
18:178939..181157
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AA seq
728 aa
AA seq
DB search
MFRKENSSVYFEGKKGKDVPLRKSDRLRLRQQAMELLCRSPPDTCSENADSEVVAFCLEQ
DAVLDAAFLQGALSSRKLILDDGRKVTMYLRSPEDGQNTSTDEISFRWPYREPSPAQCVW
LEIDFGPRNTLQVPSVVLLSVLPSSSLPTIPVPHQVSKYLCRGADLMRAGIFQLPLSWPS
SQRVVAITVAGNPQPLAVGWLDNAVKSLQDVGPQTQGIGVHVVSCYGDDLWKQQLPPKQL
RHNLNREARVNPTGGATFNAGHYGNLGFQEGVRVVPLSSSAESHPDAEGEEKHHGTASSK
STREKTNPPFPDEEETPPVLYGGENCAGMENITVSDDTYGSSKSNTLLDRDMENGEQKMP
LEATNEALLHHAVCKAVAALSKSDLPMAVATFYAQYVLPSRPQGTIINLKQTRYKKFGVY
VQEQIEQGLISVGPDVANKDPFAMLIDVNRRHPDVQHIVREEKANSPENGSSRLSGPNKL
VLIDLYTVPHHFISPLRLNSEAVTAANATSEERKNSSMLTLKEIRALLDDYLIRENLARH
NTVHLDGPLTDVLYKRKRTSGDPVQSTPQVLTRKQVALAWQDKMERGFALVKMPGNRIVK
LGRGPPPQISIEVEQRQSKKFVTRVRGLESYNIDGRVFCKDVCQRFACAGSVDSDAPAGR
ATLKKNQVELILQGNLVDALDALLTGEENVTSHGGAKASPYAIPANAISVTLRKGVPARK
RRPVPAKK
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atgttccgcaaagaaaacagtagcgtctatttcgaaggaaaaaaaggcaaggatgtgcca
ctgcgtaagtcggatcgactgcgcttgcgtcaacaagccatggagttgttgtgtcgatca
ccaccggacacttgttcggaaaatgcagattccgaagttgtagcgttctgtctagagcag
gatgccgtactagacgctgcgtttctgcaaggggctctctcgtcacggaaactcattctg
gatgacggacgcaaggtcacaatgtacctgcgatcaccggaagatggacaaaacacaagt
actgacgaaatttccttcaggtggccgtatcgggaaccatcgccagcacagtgcgtctgg
ctggagattgattttggacccagaaatacactgcaggttccgtccgtcgtcctgctttcc
gtcttacccagtagtagtctcccaacgataccagtccctcaccaagtctccaagtatctc
tgccggggagccgatctgatgcgtgctggtattttccaattacctttgtcatggccaagc
tctcaacgcgttgttgcgatcactgttgctggcaatccacaacccttggcggtcggttgg
ctcgacaacgccgtgaaatccttgcaggatgtaggtccacaaactcaaggaatcggagta
cacgttgtctcttgctacggcgacgatctttggaagcagcagctgcctcctaaacaacta
cgccataatcttaaccgtgaagctcgagttaatccaacgggcggtgcaacgttcaatgca
ggacattacggcaacttgggtttccaggaaggagttcgggtggttcccctttcctcctcg
gcggaatcacaccccgatgcagagggcgaggaaaaacatcatggaacagcttcttcaaag
agcacccgagaaaaaacaaaccccccttttcccgacgaagaagagactcccccagtacta
tatggaggtgaaaattgcgctgggatggaaaatattactgtgtccgacgacacctatggg
tcaagcaaatctaacacattgctagatagggatatggagaatggagaacagaaaatgcca
ttagaagctactaatgaggctcttctgcaccatgccgtctgcaaggcagtagccgctctt
tcaaaatcggacttgcccatggcggtggcaaccttttatgcgcaatacgtcctaccgtcg
cgacctcaaggtaccatcataaatctgaaacaaactcgatacaaaaagtttggcgtttac
gtgcaggaacaaatagagcaaggcttgatttctgtcggccccgacgtggctaataaagac
ccgttcgcaatgctaatcgatgtgaaccggagacatccagatgtgcagcatatcgtccga
gaggaaaaggcgaattctcctgaaaatgggagcagtcgcttatcgggtcccaacaagtta
gtgctgattgatttgtacacagtcccacaccattttatttccccgctgcgtctgaattct
gaggctgtgacggcggcgaatgcaacgagcgaagaacggaaaaattcaagtatgctgaca
cttaaagaaatccgagctctcttggacgactatctgatacgagaaaatctggctcggcac
aacaccgtccacttggatggccccttgaccgatgtcttgtataagaggaaaaggacgtct
ggagatccggtccaatctactccacaggtgctaacacgaaaacaagttgctttggcttgg
caagataaaatggagcgaggtttcgcccttgttaaaatgccgggcaaccgcatcgtcaaa
ttaggtcggggaccgccgccgcaaatatcgattgaagtagagcaacggcagtcaaaaaag
ttcgttacaagggttcggggtttggaaagctataacatcgacggtcgagtcttttgcaaa
gacgtctgccagcgctttgcttgtgcgggcagcgtcgactcggatgccccggccggaagg
gccacactcaaaaagaatcaggtcgagttaatcttacagggtaatctcgtagacgcgctg
gacgcgttgctaacaggcgaggaaaatgtgacctctcatgggggagcgaaggcatcaccg
tacgcgattcctgcgaatgctatcagtgtgactctccgcaaaggagtgccagcacggaaa
cgccgaccagttcccgcaaagaagtag
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