KEGG   Phaeodactylum tricornutum: PHATRDRAFT_48638
Entry
PHATRDRAFT_48638  CDS       T01075                                 
Name
(RefSeq) hypothetical protein
  KO
K04799  flap endonuclease-1 [EC:3.1.-.-]
Organism
pti  Phaeodactylum tricornutum
Pathway
pti03030  DNA replication
pti03410  Base excision repair
pti03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:pti00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    PHATRDRAFT_48638
   03410 Base excision repair
    PHATRDRAFT_48638
   03450 Non-homologous end-joining
    PHATRDRAFT_48638
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pti03032]
    PHATRDRAFT_48638
   03400 DNA repair and recombination proteins [BR:pti03400]
    PHATRDRAFT_48638
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pti04147]
    PHATRDRAFT_48638
DNA replication proteins [BR:pti03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    PHATRDRAFT_48638
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     PHATRDRAFT_48638
DNA repair and recombination proteins [BR:pti03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     PHATRDRAFT_48638
Exosome [BR:pti04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   PHATRDRAFT_48638
SSDB
Motif
Pfam: XPG_N XPG_I 5_3_exonuc XRN_N 5_3_exonuc_N HHH_5
Other DBs
NCBI-GeneID: 7194839
NCBI-ProteinID: XP_002183226
JGI: 48638
UniProt: B7G7Y7
LinkDB
Position
18:complement(<452679..454282)
AA seq 421 aa
MGIKGLAKLLSDEAPDCIREVELKSLHGRKIAIDASMAIYQFLIAVRSGGPNQQATMLTN
AEGETTSHIQGMFNRTIRYMTEGIRPVFVFDGKPPDVKSHELIKRREKREKAQAALAVAS
EEGNVEEQDKQSKRLVRAGTKENEDCRKLLTLMGVPVVTAPCEAEAQAAALCKAGLVYAT
GTEDMDALTFATPILVRKLTFANASKSMVQTMNYNKVIEGLAISHDQFVDLCIMLGCDYC
DTIRGVGPKTALKLIREHGNIEKVIETIDRKKFVVPESWVPNEKKLDAQSDDDDEEGVES
PSKEENNGIVDTEELIPAYVQARKLFNEHEVLNDIELKWKPCQAEDLQKFLVDDMGFNVD
RVKNNIEKLQAAYKANSKPQTRMDSFFAVKANPNAAKSAAKRKADAAKAKAAVSKKKTKK
H
NT seq 1266 nt   +upstreamnt  +downstreamnt
atggggatcaaagggttagctaaattgctttccgatgaggcaccggattgcattcgagag
gtggaactcaagtccttgcacggtcgcaagattgcgattgacgcttccatggctatttac
cagtttctcattgccgtccgctccggtgggcccaatcaacaagccacaatgttgaccaac
gccgaaggcgaaacgacatcccatatacagggcatgtttaatcgaacaattcgatatatg
accgaaggaattcgtcccgtctttgtttttgatggtaaacctcctgacgtgaaatcacac
gagcttatcaagcgccgggaaaaacgtgaaaaggcccaagctgctttggccgtcgcgtca
gaagaaggcaacgtggaagagcaagacaagcaaagtaaacgactagtgcgagcaggaact
aaagaaaacgaagattgccgcaaactactgacccttatgggtgtaccagttgtcacggcg
ccttgcgaagctgaagcccaggctgccgccctctgcaaggcggggctcgtgtacgcaacg
ggaacagaagatatggacgctttgacctttgctacgccgatacttgtgcgaaagctgact
tttgcgaacgcaagcaagtcgatggtacagacaatgaattacaacaaagttatcgaagga
ttggccatttcacacgatcagttcgtcgatttgtgtattatgttgggctgcgactattgc
gacacgatccgcggtgttggtccgaaaacagcgttgaagctgattcgagagcacggaaac
attgaaaaggttattgagaccatcgaccgcaaaaagtttgtcgtgcccgaaagctgggtc
ccaaatgagaaaaagttggatgctcagagcgacgacgacgatgaagaaggggttgaaagc
ccatcgaaagaagaaaacaatggtatagttgacacggaagaactgatcccagcgtacgtg
caagcccgaaaactgttcaacgagcacgaggttctcaacgatattgaactgaaatggaag
ccgtgtcaagccgaggatcttcaaaaatttctggtagacgacatgggttttaatgtcgat
cgcgtcaagaacaacattgaaaaattacaggcggcgtacaaagccaacagcaagcctcag
acccgaatggactctttttttgccgttaaagccaatcctaacgccgccaagtcggcggcc
aaacgaaaagccgacgcggccaaagccaaggccgccgtttccaagaaaaagaccaagaag
cattag

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