Phaeodactylum tricornutum: PHATRDRAFT_49146
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Entry
PHATRDRAFT_49146 CDS
T01075
Name
(RefSeq) hypothetical protein
KO
K24939
CWF19-like protein 1
Organism
pti
Phaeodactylum tricornutum
Brite
KEGG Orthology (KO) [BR:
pti00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pti03041
]
PHATRDRAFT_49146
Spliceosome [BR:
pti03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
PHATRDRAFT_49146
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Ortholog
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GFIT
Motif
Pfam:
CwfJ_C_1
CwfJ_C_2
RRM_1
Motif
Other DBs
NCBI-GeneID:
7195614
NCBI-ProteinID:
XP_002183802
JGI:
49146
UniProt:
B7G9N0
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All DBs
Position
21:<56294..>58864
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AA seq
856 aa
AA seq
DB search
MASSVSGKLKVLLFGTVGDETDALIEKVAALHGSKAGPFDAAFCVGPVNVARLLQNERTL
TIPTYLQDDSLREEPNPSSPKSDWNHNAPEDCNQNFVPLAENLYLLRTPEHPAAANVWSL
SVAPRKPALVVVACPARFRVDQTTVAQPLLDQLRHVSYTGCDLLLTTEAPQGMESIIGSE
SVTPSFPTPGSALAVSYDVAEVALLARARYHVVPSPNGLFQQSPAFAHLSATTHTTNTLH
VGRVLTLGPVQPVTDWKIAPKTHKFVHALGLQPLHQQSITEQQGQRPAHVLTNPFTDTAY
QRDGPPSTNGGHNSGLSEASARRILAEEQHKRSGGDPSQRWSSTGPHRPKRSRENDYQEQ
NVDLTCRTLFLHGLHKDVSGQLQSATGGDQVLLQALASFGAEQIRRPPQATTSSFCFCEF
GTHDQALQCLQTLGGSLTVHGVLLTVKWATTVNAATGPDGSNPKRQRLTEPEARESSTIH
YKLPPQMLNGPNSPSHETVAETLRTWMEHTLEYALASEDDTDHATPTVQAADEPALQVQK
RLPSDEAMTFGFLDFASHAAASMALATLTGSTDGGRVTMENAKRVPEVFKSLWGGSAADT
QPLYLNWARPKEADVHNIIEDASGFKFERRHFPADARKDCWFCLASEACEKHLITGVYQS
CYAAMPKGPVHQGHVLLIPVKHSSQGALKDSIVAQEMDALKSKLRKHAYSVYDSDLFVFE
RAIQTKGGYHTHVQCVPVPKRSGIQLQSTMIAQARKTGMQLRELTSDLALAAMFTDEDNE
GGYFYAEIPLAGTDFKRFLYKADGQGQTPLQFGREVIAAVLGKPSLAHWKSCLLDREEET
AMASLFRESFEKFCLD
NT seq
2571 nt
NT seq
+upstream
nt +downstream
nt
atggcatcgtcggtatccggcaaactgaaagtcttgttgtttggcacggtgggggacgaa
acggacgccttgatcgagaaagtggcagccctgcacggcagcaaggcgggaccctttgac
gctgccttttgtgtaggacccgtgaacgtagcccgtctgctccaaaacgaacggactctg
accattcccacctatctgcaagacgattcgttacgtgaggaaccaaacccgtcctcacca
aaatctgattggaaccacaacgctccggaagactgcaaccaaaatttcgtaccactcgct
gagaatctgtatttattgcgcactccagagcaccctgccgccgccaatgtgtggagtcta
tcagtggcgccccgcaaacccgccctggtagtagttgcgtgtcccgcacgcttccgcgtc
gaccaaaccaccgtcgcccaacccttgctcgatcaactccgtcacgtttcctataccgga
tgcgacttgttgctgactacagaagctccgcaaggcatggaatcaattattggctcggaa
tccgtaacaccgtcgtttccaacgcccggatcggccctcgccgtctcctacgacgtggcc
gaagtcgccttgttggcacgggcccgttaccacgtggtgccatcccccaacggactcttt
caacaatcacccgcctttgcccatttgtccgccacgacccataccaccaatacccttcat
gtgggtcgcgtcctgacgctcggaccggtacagcccgtgacggactggaaaatcgccccc
aaaactcacaaattcgttcacgccctgggactacaacccctccaccaacaatcgattacg
gagcagcaaggtcaacgacccgcacacgttttgaccaatcccttcaccgacactgcctat
caaagggatggtcctcccagcacgaacggtggccacaatagcggactttcggaagccagt
gcgcgccgcattctggcggaagaacagcacaaacgatccggcggagatccgtcccaacga
tggagtagtacaggtccccaccgtcccaaacgatcgagggaaaacgactaccaggaacag
aacgtcgacctaacatgtcgtacgctctttttgcacggcctgcacaaggacgtatccgga
caattgcaaagcgccactggcggggatcaggtactactgcaagcattggctagcttcgga
gccgagcaaattcgacgaccgccgcaagccacgaccagcagtttttgtttttgtgaattt
ggaacacacgaccaagctctccaatgcctgcaaaccctgggcggaagtttgaccgtccac
ggtgtgctcctcaccgtcaagtgggccaccactgtgaacgcggccaccggcccggatgga
tccaatccgaaacgtcaacgtctcaccgaacccgaagcccgtgaatcgtcgactatacac
tataagctacccccacagatgctgaacggtccgaattctccttctcacgaaaccgtcgcc
gaaaccctacggacctggatggagcatacgttggaatacgctttggcgtcagaagatgac
acggaccacgccacacccaccgtccaggccgcggacgaacccgctttgcaagtccaaaag
cgcctaccgtccgacgaagccatgacgtttgggtttttggattttgcctcgcacgctgcg
gccagtatggctttggcgacattaacgggcagtacggatggaggtcgagtgacaatggag
aatgccaaacgcgttcccgaggtattcaaatcgctgtggggcgggagtgcggcggatacg
cagccgttgtatttgaactgggcgcgcccgaaggaagcggacgtgcacaatattattgaa
gatgcttccggttttaaatttgagcgtcgccatttccctgccgatgcacgaaaggattgc
tggttttgcttagccagtgaagcttgtgaaaaacatttaattacgggagtgtatcaaagt
tgctacgcggcaatgcccaaaggtccagtgcatcaagggcacgttttgttgattccggtg
aaacacagcagtcaaggagcattgaaagattcaatcgttgcccaagaaatggatgcactc
aagtcaaaactaagaaaacacgcatacagtgtctacgatagcgatttatttgtgtttgaa
cgcgccattcagacaaagggcggttatcatacccatgtgcagtgtgttccggttcccaaa
aggtcgggtattcagctgcagtccaccatgattgcccaagcgcgaaagaccggaatgcaa
ttgcgcgaacttacctccgatctcgcgctcgcggccatgtttaccgatgaggataacgaa
gggggctacttttatgcggaaataccgctggcgggaacggatttcaagcgctttctatac
aaagcggacggtcagggacagactccactacaatttggccgggaagttatcgcagctgtc
ctgggtaaacccagcctagcacattggaagtcctgtctgctagacagagaagaagagact
gcaatggcatcattgttccgtgaatcttttgaaaagttctgtttagattag
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