Phaeodactylum tricornutum: PHATRDRAFT_49405
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Entry
PHATRDRAFT_49405 CDS
T01075
Name
(RefSeq) hypothetical protein
KO
K13345
peroxin-12
Organism
pti
Phaeodactylum tricornutum
Pathway
pti04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
pti00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
PHATRDRAFT_49405
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pti04121
]
PHATRDRAFT_49405
Ubiquitin system [BR:
pti04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Peripheral membrane proteins
PHATRDRAFT_49405
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pex2_Pex12
zf-C3HC4_2
zf-RING_2
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_3
Xre-MbcA-ParS_M
Lock_Gag1-like
Motif
Other DBs
NCBI-GeneID:
7195790
NCBI-ProteinID:
XP_002184072
JGI:
49405
UniProt:
B7GAH4
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Position
22:170721..172342
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AA seq
415 aa
AA seq
DB search
MTDGLNPTNPNSIGALIAEEWTINPFSPLPSFLEMIMMEEASRATRQAFLAGSKFAQNAL
LARTTMGDDLPTSTAETNNHLDTHFSILTSTLHKWKNQIMLAAGSLLQNYGAEIRCIAIY
LLERRSLHYFSATMAESMYGARRVKLEKADRSGSRKLSDLSSVDKTRLALLLSLGPYLSE
KLDSLHSEYRDPRERHRLPSTPLAAIWNSYPYARRLFDYSNALVQWRFLLGQSVIFDPAS
FLLEQVVRRVTKEDTDSNSTKPSKEKDIPAIAFPPASFASPMLSKYLHSPSKSQIGYFLA
ASVAFSWLTQLRRDVDTYQHESRSQRRAYETVGSHSGTGFIPPPPMPTSSRAAVVAAEEE
CSLCRKVRTQPTASPSGFVYCYDCLLRYVRKHGVCPATNMQCTEANFVRIYEPWL
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgacggacggtctcaaccccacaaatccaaactcgatcggagcgttaattgccgaagaa
tggaccatcaatccattttcgccattaccctcgttcttggaaatgataatgatggaagag
gcatcacgggcgacgcggcaagcatttcttgcaggtagtaagttcgcacaaaacgcgctt
ttggctcgtaccaccatgggcgatgatttgcctacatcgacagcagagaccaacaaccac
ttagatacacacttttcaattcttacatccacactgcacaagtggaagaaccaaatcatg
ctagctgctggctctcttcttcaaaattatggtgcagagatcagatgtatagcaatttat
cttttggaaagacgttcacttcactacttttccgcgacgatggcagagtctatgtacggg
gcccgtcgtgtcaagctagagaaggccgacagatcaggaagtcgtaagcttagcgacctt
tcgagtgtggacaaaacgagattggcattgcttttgtctttgggtccatacctctctgaa
aaattggattcactgcatagcgaatacagggatccacgggaacgtcaccgccttccaagt
acaccactagcagcgatctggaattcgtatccgtacgcccgacgcttgtttgactattct
aacgcgctcgtacagtggagatttcttttgggacagtctgtgatcttcgacccagcttca
tttctattagagcaagtagtgcggcgggttacgaaggaagatacagatagcaactcaaca
aaaccttccaaagagaaagatattcctgcaattgcattcccaccagcaagttttgcatcg
ccaatgttatcgaaataccttcattcccccagtaaaagccagattggctatttcttagca
gcgtccgtcgccttcagctggctcacgcaattacgccgcgacgtagacacatatcagcat
gagagtcgctcacagcgacgagcttatgagacggtcggcagtcatagtggtacaggcttt
attccaccgccaccaatgccgacctcatcgcgagcagcagtggtcgcagcggaagaggag
tgctccctttgccgtaaggttcgaacgcaacctacggcttctccatctggatttgtctac
tgttacgattgcttgcttcggtatgtaaggaagcacggcgtatgcccagccaccaacatg
caatgtacggaggcgaattttgttcgaatatacgagccctggctatag
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