Phaeodactylum tricornutum: PHATRDRAFT_49527
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Entry
PHATRDRAFT_49527 CDS
T01075
Name
(RefSeq) hypothetical protein
KO
K11274
chromosome transmission fidelity protein 4
Organism
pti
Phaeodactylum tricornutum
Brite
KEGG Orthology (KO) [BR:
pti00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pti03036
]
PHATRDRAFT_49527
Chromosome and associated proteins [BR:
pti03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Other sister chromatid cohesion factors
PHATRDRAFT_49527
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mcl1_mid
WD40
Ctf4_C
Beta-prop_EML_2
Beta-prop_THOC3
WD40_WDHD1_1st
DUF6476
Beta-prop_WDR3_2nd
Motif
Other DBs
NCBI-GeneID:
7195858
NCBI-ProteinID:
XP_002184268
JGI:
49527
UniProt:
B7GAX1
LinkDB
All DBs
Position
22:complement(<520431..>523832)
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AA seq
1089 aa
AA seq
DB search
MPTTNSPVESRTLSWTDLGLDTDEDHPRRLLRVRDDVIAYGGDEGTLVRLPFVTTSNAQN
ADTGSTRPLAVRRFDEDAIRAVAVSDDGTRVAVGTDSGATLFYRYELDGHVVDAPGKGLV
SRHGFVTHDSDDNNNNNNNSHQKPSADLFGSQPDALAFVPQQRPGEVVRHGPVFDAPVRQ
LLFLPDSHFLAIATEAGLAVVSTHTDSGIGGGSLDANHNDHNNNHNVKYLHREAQTAHDE
SGIRGLALWQAKDCRILSSLAMDGRLCHWDVSAPTPTLWKLLHRETVPTVTKPDLGEMLG
ADAWDRSTIPVAHSHESILFLPGETYVQARRYRNHTWELLQSPTGATNTTDKVQGHIEAI
VAMAPAPNPRDPYLVTSGRDGRVVLWKLQYSHHDNNNNDNNPNDNGDGHIVFQKQILQTD
SAPTHLLWTLDQPTQTERLDMVTADGHWTTLVGRDQIAPACPTTAVTQEISLPHRQSADS
VREKEKEHDADSDDSVDDFSSNKPSTHQKNPFVDDEAEDDNDDDTLDTASRGKLETTSPT
DKRASNLNSSALEEHHNDLDDDSIGDDDDSFHNIPTLTTRHSDSIQWPEPQPAFGPSSTS
LELTRRFLCWNHIGSVTFLRGQAGINRSTIDIHFTDSAFRRPVSFTDNMGFILGSLGEDG
GIFATDLAEDEDIDEEDDDMDGLNVSAATKAAVKRSRKGPSNKPTGSSIYFHRFETFGSL
RDKDWYLTLPDGERALGCASGEGWAAVVTSRRFLRLFSSGGNQGEVLWLNGHPVTMAGRG
RFVAVVYHESTPLPDGTQKLGYLVLDAMANRVVAKGPVSCISGASTLSWLGFSNDGSLLA
MDSDGMLSMLVCASSLDAEGPTEKHWEWMPMLDTVGLRKSRDDSFWPVTVYDGKLVCVPL
KGGMKHPDAVRRPVTAALGFRLPLARGPLTKTHTLEELAVRAAIALGQKKAIHEISREGD
EDDEDFEKEYRSLSAQVDKVTLKMFAAIAEAGKLERALDLVERLHLEKSYDLAMTIGDRH
RKLVDLIEEAKDRKFGDPGSHQAEFTTKAESPNYQRPRISPDSAGAKRSLDDEDENVRSR
LVRRKPTFA
NT seq
3270 nt
NT seq
+upstream
nt +downstream
nt
atgccaacgaccaattcgccagtcgaaagccgaacgttgtcgtggacggatctcgggttg
gacacggacgaagatcacccgcgtcgtttgttgcgtgtgcgggacgacgtgattgcctac
ggcggcgacgaaggcacactggtacgcttacctttcgtcacaacgagcaacgcccaaaat
gccgacacggggtccacgcgacccttggccgtgcgtcgctttgatgaagacgccatacgt
gccgtcgcagtctcggacgacggaacccgcgttgccgtcggaacggatagcggtgccact
cttttctaccgttacgagttggatggacacgtagtagacgcacctggaaaggggctcgtc
tcccgacacggatttgtcacgcacgacagtgacgacaacaacaacaacaacaacaactcc
caccagaaaccctcggcagacttgtttggatcgcagcccgacgccctcgcctttgtccca
cagcaacgtcccggggaagtcgtccgtcacggacccgtatttgacgctcctgtacggcaa
ctcctctttctccccgactcgcatttcctcgccattgccacggaagccggattggccgtt
gtttccacccataccgacagcggcattggtggtggcagtctggacgctaaccacaacgac
cacaacaacaaccacaacgtcaaatacctccaccgggaagcccaaacggcacacgacgaa
tccggcatacgcggactcgccctctggcaagcaaaggactgtcgtatactctcctcactc
gccatggacgggcgtctctgtcactgggatgtctctgctcccactcccacactctggaaa
ctactgcaccgcgagacagtaccgaccgttaccaagcccgacctgggcgaaatgctcggt
gccgatgcctgggatcgatccaccatccccgtcgcccattcccacgaaagcatactcttt
ttgcccggagaaacctacgtacaggcgcgtcgctaccgcaaccacacctgggaactccta
cagtcccctaccggggccaccaatactaccgacaaagtacagggacacattgaagccatt
gtcgccatggccccggcacccaaccctcgagatccgtacctcgtcaccagtggacgcgac
ggacgagtcgtcctctggaaactacagtactctcatcacgacaacaacaacaacgacaac
aatccaaacgacaatggtgacgggcacattgtctttcaaaaacaaatcctccagacggat
tccgccccaactcatttgttgtggacactggaccaaccgacgcaaacggaacgtctcgac
atggtgaccgccgacggacactggactactctggtaggacgcgaccagattgctccggcc
tgtccaaccactgcagtgacccaagagatctccctcccacaccgccaatcagccgattcc
gtgcgggaaaaagagaaggaacatgacgcagactcggacgacagcgttgatgacttttct
tcgaacaaaccttccacacaccaaaagaatccgtttgtggacgacgaggcggaggacgac
aacgatgacgatacgctcgatacggcctcgcgtggaaaactggagacgacctcaccaacg
gacaagcgcgcctccaatcttaacagcagcgctctcgaagaacaccacaatgatctagac
gacgactccatcggtgacgatgacgactccttccacaacattccgactctcaccacgcga
cattccgattcgatccagtggcctgaaccacaacccgcctttggtccttcttccacatcg
cttgaattgactcgccgctttctgtgctggaatcacattgggtccgttacgtttcttcga
ggacaggccggcatcaaccgcagcacgatcgacattcactttacggactcggcatttcgt
cggcccgtttccttcaccgataatatgggcttcattctggggtccctgggggaagacggc
ggaatattcgccaccgacttggcggaagacgaggatattgatgaggaggacgacgatatg
gacggcttgaacgtgtcggctgctaccaaggccgccgtcaaacgttcgcgcaagggtcct
tcgaacaaaccgaccgggtcgagcatttactttcatcgcttcgaaacgttcgggtcctta
cgcgacaaggattggtacttgacgctcccagatggggagcgggctttggggtgtgcgtcc
ggtgaaggatgggccgccgtcgtaacgagtcgccgtttcttgcggctcttttcttcgggc
ggcaatcaaggagaggtgctttggctgaacggccaccccgtcaccatggctggacgggga
cggttcgtcgcggtggtgtatcacgaaagcacaccgttaccagatggaacccaaaaactc
ggatacttggtgttggatgcgatggcgaatcgcgtagttgccaaggggccagtgtcatgt
attagcggtgcatcgactctttcatggttggggttcagcaatgatggatctctgctggcc
atggattcggatggtatgctgtcaatgttggtttgcgcatcatccttggatgcggaggga
ccgacggaaaaacactgggaatggatgccaatgctggacacggtggggttacgtaaatcc
cgggacgattccttctggccggtcacagtttatgacggaaagttggtgtgcgtcccgctc
aagggtgggatgaagcatccagatgcggtgcgccgtcccgtcacggccgctctcggcttt
cgtcttcccctggcccggggtcctttgaccaagacgcacacgttggaagagcttgcggtg
cgcgccgcgattgcgctggggcagaagaaggccattcacgagattagccgggaaggcgac
gaggacgacgaggactttgaaaaagaataccgttccctttcggcccaagtggacaaggtc
acgctaaaaatgtttgcagcaatcgcggaagccggtaaattggagcgcgctttggatttg
gtggagcgtttgcatttggaaaagagctacgacttggccatgacgattggcgaccggcac
cgcaaacttgtcgatttgatcgaagaggccaaggatcgcaagtttggagatccgggatcg
caccaagccgagtttacgaccaaagcggaatccccgaactatcaacgcccccgcatctct
ccagattcggccggggcaaaacgcagtcttgacgatgaggacgagaacgtccgaagccgt
ctcgtgcgtcgcaaaccaacgtttgcctaa
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