Phaeodactylum tricornutum: PHATRDRAFT_49632
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Entry
PHATRDRAFT_49632 CDS
T01075
Name
(RefSeq) hypothetical protein
KO
K12183
ESCRT-I complex subunit TSG101
Organism
pti
Phaeodactylum tricornutum
Pathway
pti03250
Viral life cycle - HIV-1
pti03272
Virion - Hepatitis viruses
pti04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pti00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
PHATRDRAFT_49632
03272 Virion - Hepatitis viruses
PHATRDRAFT_49632
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
PHATRDRAFT_49632
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pti04131
]
PHATRDRAFT_49632
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pti04147
]
PHATRDRAFT_49632
Membrane trafficking [BR:
pti04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-I complex
PHATRDRAFT_49632
Exosome [BR:
pti04147
]
Exosomal proteins
Proteins found in most exosomes
PHATRDRAFT_49632
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UEV
Vps23_core
UQ_con
TMEM171
TFIIA
Motif
Other DBs
NCBI-GeneID:
7198289
NCBI-ProteinID:
XP_002184333
JGI:
49632
UniProt:
B7GBA3
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All DBs
Position
23:260494..262077
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AA seq
420 aa
AA seq
DB search
MVNDPRVTRQLSRLGGLYRDPARVDRDATAVLRSSVGEHLTPIASELYEDKGSHSTVLVL
QGTIAMDFRGTTYQLLMDVYLPGGYPQRPPVCYVRLADHMYLKENHRHVASDGKVYLPYL
HEWTPQQHNLVELVIQMSSVFSADPPVFSRAPAAVTPPPPPAYAAATIHNDTRSSRSTTT
TTTTNSNHTRSSSFQREQRQREMEAERRLAQDAAEANAAVAAARRAAQAEQEREVQRLAQ
QAWEDTKTDQLRQKLTFKTQRHFVELSKQTQQQVQADERHKQSLVHAESKIDAQIKALEK
QKETLEGHLSTTREKTIAIQASVRAHEERLTESLEAEAVPADELVKPASALHAQMVALAA
ENAALTDVLYFLDRGLYAGKLDAVAHLKQVRKLAKKQFLVRAHLIKINQVLLDSSNNSRR
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atggtgaacgatccgcgggtgacgcggcagctttctcgtttaggtggactctaccgcgat
ccggcacgggtggatcgggacgccacggcggtgttgcgatcgagcgtcggggagcacttg
actcccattgcgtcggaactgtacgaagacaagggttcccattccaccgtgttggttttg
cagggcacgatcgccatggactttcgtggcacgacgtaccaactgctgatggacgtctac
ctacccggaggctacccccaacgtccacccgtatgttacgtgcgtttggccgatcacatg
tatctgaaagaaaatcatcggcacgtggcgtcggatgggaaagtctatttgccctatttg
cacgaatggacaccgcaacaacacaatttggtggaattggtcattcaaatgagttcggtt
ttttctgcggacccgccagtcttttcccgcgcacccgccgccgttacgccgccaccgcca
ccagcctacgccgctgcgaccatccacaacgatacacggagtagtaggagtacaacaaca
acaacaacaacgaatagcaatcacactaggagcagtagttttcaacgcgaacaacgtcaa
cgggaaatggaggccgagcgtaggctggcgcaggatgctgccgaagccaatgcggcagtc
gccgccgcccgacgggccgcacaagcagaacaagaacgcgaagtccaacggttggcgcaa
caagcttgggaagataccaaaaccgaccaattgcgccaaaaattgactttcaagacccaa
cgccattttgtggaactctccaaacaaacacaacagcaagtacaagcggatgagcgtcat
aaacagtcgttggtccatgcagaaagcaagattgacgcgcaaatcaaagccctggaaaaa
cagaaggagaccttggaagggcatttgtccacgacacgtgagaaaaccattgctatacaa
gcttcggtacgggcgcacgaagaaaggctgaccgagtccttggaggccgaggctgtaccg
gctgacgagctggtgaagccggccagtgcgctgcacgcacaaatggtggctctggcagcc
gaaaacgcggcgttgacggatgtactctattttctcgaccgtggtctgtacgcgggcaag
cttgacgccgtggcccatctcaaacaggtacggaaactcgccaaaaagcagtttctggtc
cgggcgcatcttatcaaaatcaatcaagtacttctggacagcagtaacaatagtcgtaga
tga
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