KEGG   Phaeodactylum tricornutum: PHATRDRAFT_49801
Entry
PHATRDRAFT_49801  CDS       T01075                                 
Symbol
hHrd1
Name
(RefSeq) hypothetical protein
  KO
K10601  E3 ubiquitin-protein ligase synoviolin [EC:2.3.2.27]
Organism
pti  Phaeodactylum tricornutum
Pathway
pti04120  Ubiquitin mediated proteolysis
pti04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:pti00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    PHATRDRAFT_49801 (hHrd1)
   04120 Ubiquitin mediated proteolysis
    PHATRDRAFT_49801 (hHrd1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pti04121]
    PHATRDRAFT_49801 (hHrd1)
Enzymes [BR:pti01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     PHATRDRAFT_49801 (hHrd1)
Ubiquitin system [BR:pti04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    PHATRDRAFT_49801 (hHrd1)
SSDB
Motif
Pfam: zf-RING_2 zf-rbx1 zf-C3HC4 zf-C3HC4_2 zf-C3HC4_3 zf-RING_11 zf-RING_16 zf-RING_5 zf-RING_UBOX zf-ANAPC11 zf-HC5HC2H zf-RING_Vps41
Other DBs
NCBI-GeneID: 7198372
NCBI-ProteinID: XP_002184604
JGI: 49801
UniProt: B7GBY3
LinkDB
Position
24:complement(363488..365386)
AA seq 632 aa
MTIIPMDDHGNDDDHDEQRLQRERERAVEQMLWAQEQAEQQDQRQSAHDPNPTRLPPPDD
PAVPFPPLPDEQEPPLPPPLSHQNKSWSYTQWSFAAAGATLWYALRTRDEQWYLAVVYLH
SSRWACAVLGNALLAAAVATFQLTVRLFLPNGGLRVHEAEGLQDFFRWNVTETCLALTMF
RSELTVQTAVEFVVLILCKCLHHVANMREQHVRMTQDAVVRWRPERIAPQASWPPLPAVP
TAHWRILVFLGILQLGDLYALQYFGRDIAERGPSVNILFAFEAAILLVSAWSHLLLWHIY
VGDGLLHFGHDHYPRSFVARWLHTWKEYKATLTFAVELQAQTVQFLFYLTFFAIVMTYYG
VPINLFREVYVSFAALKDRLWAFLRYRQLMASMDRFDSVTDEELEQAGRDCIICRDEMKT
HDCKALPVCRHLFHKSCLREWLVQQQTCPTCRSDIGANEVTQERRRAAQAAAQERQSADE
STPSPATTSPDILSPADASGSVEPTSGAESPPTLTEEDGHDFETMLRHYQTTLQARIRQR
SRPALVLPGLYQVTRSSGASVYTGAHDDATHQTPTVVRTVPRGVVVLALEGATLRFVGPE
PVEAVRIPDGWMALADVEFRLAIGKEAPRSAI
NT seq 1899 nt   +upstreamnt  +downstreamnt
atgacgatcataccgatggacgaccatggcaacgacgacgaccacgacgagcaacgactc
cagcgtgagcgcgaacgcgccgtggagcaaatgctctgggcacaggagcaagcggaacaa
caagaccagagacaatcggcacacgatccgaatccaacacgtttaccaccacccgacgat
cctgccgtacccttccctccgctccccgacgaacaagaaccgcccctgcctccgccattg
tcccaccaaaataagtcctggtcctacacgcagtggagtttcgccgccgccggagcgaca
ctctggtacgcactacgcacccgggacgaacagtggtatctggccgtcgtctatctccat
tcctcgcggtgggcgtgtgccgtcctcggcaacgcgctactcgccgcggccgtcgccact
ttccaactcaccgtccgtctgttcctacccaacggaggcttgcgcgtacacgaagcggaa
ggtttgcaagatttctttcgttggaacgtgacggaaacgtgtctcgccttgaccatgttc
cgctccgaactgaccgtgcagacggcggtggaatttgtggtcctcattctctgcaagtgt
ctacaccacgtggcgaatatgcgggaacagcacgtccgtatgacgcaggatgccgtggtc
cggtggcgtccggaacggatcgcaccacaagcctcctggccaccactccccgccgtgccg
acagcgcactggaggatcctggtctttttgggaatcctccaacttggtgatctctacgca
ctccagtactttggtcgggacattgccgagagaggaccctccgtcaatatactcttcgcc
tttgaagccgccattctcctggtctcggcatggagtcacctgttgctctggcatatatac
gtaggggacggattgctccattttggacacgaccactatccgcgcagtttcgtggcgcga
tggctccatacctggaaagaatacaaggccaccttgacgtttgcggtcgagttgcaggca
caaaccgtacagttcctcttctatttgacctttttcgccattgtcatgacgtactacggc
gtaccaattaatctgttccgggaagtatacgttagttttgccgcactcaaggaccggctc
tgggcgtttctgcgctaccgccagctcatggccagcatggaccgcttcgacagcgtcacg
gacgaggaactcgaacaagccggtcgggattgcattatttgtcgagacgaaatgaaaacg
cacgactgcaaagccctgcccgtatgccgccacctattccacaaatcctgtctccgcgaa
tggctcgtccaacaacaaacctgtcccacctgtcggagtgatattggtgccaacgaggtg
acgcaagaacgacgccgtgcggcacaagccgcagcgcaagaacgacagtccgccgacgaa
tcaacaccgtcgcccgccaccacgtcaccagatattctgtcacccgcggatgcgagcggt
tccgtggagccaacgtccggggctgaatccccacccactctcaccgaagaagacgggcac
gatttcgaaaccatgctccgacactatcaaaccacgctacaagctcggattcgacaacga
tcgcggccggctcttgtcctgcccggactgtaccaggtcacgcgatcaagtggtgcgtcc
gtttacaccggtgcacacgacgatgccacccaccaaacgccgaccgtggtgagaaccgtt
ccccgtggcgtcgtcgtgctggctctcgagggagcaacgctacggttcgttggtcccgaa
cccgtcgaggccgtacgtattccagatggttggatggccctggcggatgtagaatttcgg
ctcgccattggtaaagaagcaccacgctcagcaatttaa

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