Phaeodactylum tricornutum: PHATRDRAFT_50221
Help
Entry
PHATRDRAFT_50221 CDS
T01075
Name
(RefSeq) hypothetical protein
KO
K15216
RNA polymerase I-specific transcription initiation factor RRN3
Organism
pti
Phaeodactylum tricornutum
Brite
KEGG Orthology (KO) [BR:
pti00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pti03021
]
PHATRDRAFT_50221
Transcription machinery [BR:
pti03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
Transcription initiation factors
PHATRDRAFT_50221
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRN3
Motif
Other DBs
NCBI-GeneID:
7199086
NCBI-ProteinID:
XP_002185107
JGI:
50221
UniProt:
B7GDC9
LinkDB
All DBs
Position
28:<31212..34006
Genome browser
AA seq
745 aa
AA seq
DB search
MKYFLFGARLGRTSSFLAKSEIYESLPLTFGTLVGKPFRCNMSKIDDTTQERFTPYCASI
RRNPEKSVGEQLVLPKCKMPTRAEIEPVELFVASAVQQQYESGDGTNPTENYSALIDPFL
VRKDLAMIHRILLALRTSGHGATLNRLASSARHARLIHHIIRLNPFRLPCPAESQSSMDD
YVDYDIADAQLHLMMALVSANSVFMIPILTSLWSMLSFESVDAPFEQTQRLHAAMATIVR
LCPKAKKVVRYVPAMEAQVLEFLIEKSLEMDVEIKIDEGGEAEIDTDYSVFQLDMDSDAH
SLRRRQLNEVNVQESIVNDMAEKLDSLMFLLLEYVEQSCAGNADLIREKYRILAQFFESS
IIITHKSKFVQFLIVHVCGLENKALESASCQNDQSPAILYRKFASSLIHVIVDPYRATVT
RQAAACYLASFVSRASFVCEETCCESVCALLRWGEAYMQSLDSLSVHAADAREQCNFHSL
FYTISQAAFYIMCFRGVEAIEFYRKSTKPSSDGFAQPEHLDISPERWTSLCSHPLQPLRY
CLESVRNEFLELSKFCHLINAIVYCQLAQDENNVVKRNKRQVTPIATPATLEKERLSGGV
GGLGKGTNPLDSFFPFDPYLLRKSHVFVDPFYNHWNGSITERFMKDEDSVLNPSDEQHVD
DDESDNKKGSIADGVSHDDFDNEIVTKSFQPMSLGSEFGPASASSRSTVSTESSSNVPFK
RDSSREPWTDTMKRSRAPSMENGSW
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
atgaaatatttcctattcggggctcgtctaggccgcacttcctcttttctggccaaatcc
gagatttatgaatcgttgcctttaacatttggcaccttagttggcaaaccgttccgctgc
aacatgtccaaaatagatgatacaacccaagagcggtttaccccatactgtgcatcgata
aggaggaatcctgaaaaatccgttggggagcagcttgttctgccaaaatgcaagatgcct
actcgtgccgaaatcgaaccggtcgagttgtttgtggccagtgcagtgcaacaacagtac
gaatctggggatggtaccaatccaactgagaactacagcgcattaattgatccttttcta
gtaagaaaagatctcgctatgatccaccgcattcttttggctctgcgtacttcggggcat
ggcgcaacattgaatcgtctagcttcttcggcgcggcatgcccgacttattcaccatatt
attcgattgaatccctttcgactaccgtgtcccgcagaatcgcaatcttcaatggacgac
tatgtggactatgatatcgctgatgcgcaactgcatcttatgatggctttggtgtcggca
aactcagtttttatgatacccatccttacctcgctttggtcaatgttatcgtttgaaagt
gttgacgcacccttcgaacaaacgcaacggcttcatgctgcaatggccacaattgttcga
ctttgcccaaaggcaaaaaaggtggttagatatgtccccgccatggaagcacaggttctc
gagtttttgattgagaaaagtttagaaatggacgtcgagataaaaattgacgaaggtggg
gaagctgaaatcgacacggactacagtgtttttcaattggacatggactccgatgcacat
tcattgcgacggaggcagctaaatgaagtgaatgtacaggaaagtatcgtgaatgatatg
gccgaaaagctcgactccttgatgtttcttttgcttgagtatgtcgagcaaagctgtgct
ggcaatgcagatctcattcgtgagaaatatcgcattcttgcccaattttttgaatcctcc
attatcattacgcacaagtctaagtttgtacagtttttgatagtgcacgtttgtggcctg
gaaaacaaggcgctggaatcagcatcttgccaaaacgaccagtccccagcgatactctat
cgaaagtttgcgagcagtcttattcatgtgattgtagatccctaccgtgcgacggttact
cgacaagcagctgcttgttatttggcgtcgtttgtcagtcgagcttcgtttgtttgcgaa
gaaacttgctgtgaatcggtctgtgctcttttgcgatggggtgaagcatatatgcagtca
ttggactcgctttcggttcacgcagctgatgcacgagagcaatgcaattttcactcattg
ttttacacgattagtcaagcagcattttacatcatgtgttttcgaggggtggaagctatt
gagttttatcgaaaatctacgaaaccatcgagcgatggttttgcccaaccagagcatctc
gatatttcacctgagcgatggacgagtctctgctcgcatccactacagccccttcgttac
tgcttggaaagcgtgcgtaatgagttcctggagttgtccaagttttgccacctcatcaat
gcaattgtctattgtcaactagcacaagacgagaacaatgttgtcaagcgcaataaaagg
caggtaactcctatcgcaacaccggctacattggaaaaggaacgccttagtggcggcgtt
ggaggtttgggaaaaggtaccaatcctcttgattctttctttccatttgacccgtatttg
ctgcggaaatcacatgttttcgtggacccattttataatcattggaacggttcaatcacg
gagcggtttatgaaagacgaagacagcgtcttgaatccctcggatgagcaacatgtggat
gacgacgaatctgacaacaaaaagggtagcattgcggatggtgtgagccatgatgatttc
gataatgaaattgtgacgaaatcgtttcagcctatgagtcttggctcagaattcgggcca
gcaagcgcttcgagtagatcaactgtttccactgaaagctcatcaaacgtccctttcaag
cgagattcttcgcgagaaccatggaccgatactatgaaaagatccagggctccgagcatg
gaaaacggtagctggtaa
DBGET
integrated database retrieval system
