Phaeodactylum tricornutum: PHATRDRAFT_50246
Help
Entry
PHATRDRAFT_50246 CDS
T01075
Name
(RefSeq) hypothetical protein
KO
K14567
U3 small nucleolar RNA-associated protein 14
Organism
pti
Phaeodactylum tricornutum
Pathway
pti03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pti00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
PHATRDRAFT_50246
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pti03009
]
PHATRDRAFT_50246
Ribosome biogenesis [BR:
pti03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
PHATRDRAFT_50246
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Utp14
Motif
Other DBs
NCBI-GeneID:
7199020
NCBI-ProteinID:
XP_002185123
JGI:
50246
UniProt:
B7GDF7
LinkDB
All DBs
Position
28:<91559..>94030
Genome browser
AA seq
823 aa
AA seq
DB search
MGKRKQHQQLPKIADHVSESEDEEIEEDEAFNSEDERKYGGFFERGLAPESSKTATVDSD
AESEEDEDSDNIADRNGSEEGDGGQYMLDMLDILGEDSSKKNSREIKTPQMAISVKESEF
SASVLPSANLTLDSLMKGLEDTKGFGVVQKTMKKIAQGHATAAPVARVVSERAQRKVHYE
QQTKEVDKWIDAVQENRQAETLDFRPKERLEISRDVLVDKFVPTTDFEKQLHEALQEAGQ
LDEEDMLRAEERALQDDLGANEITMEEYKQRRGQLAKMRALMFYHEQKRHHMNKIKSKKY
RRIRKKQRLRGKEGELEAEMEENPDLVRELQEKEEVDRMKERMTLAHKNTSKWARRILKR
GKNVDVDTRRALSAQNKRGDELLKKMYSGSGEEDGDDSDSEDLIEAARKVLQDTEEEEVA
GSSKGKGLLNLSFMQRGIEKQREKAKEEARQLLLELEANERIETSDNDGDTNMNSKKKKR
VAGAAEMKAVLKEGALVVSSLQTGGSASVAMSGGIDINSDFADQNEAKMSSYASEHTAAL
SLGNSPKYIQPRQLVKPMEKKGSNTQDLCPQPDNEVNPWLLLKSQGNEVSDTASMTSRPG
IGAKLSLSNQALVIDPEKAVYMMEQKGDTELSVNKIFTNDVVTSTEKKITMLTQEELVRK
AFAAPSDKEIEEEFANEKDAIQDSEDPTRTRKKDKLSNTVSGWGSWTGKGAPPPKPPKKI
PRHLLPPEQKLSKRKREDATKPNVIISEKRIRRTADKFMISQIPYPYTSREEYERAMVGG
LGREWNVTSSMKDMTRPEIMTRSGKVIQPISKKVKQKRPAARF
NT seq
2472 nt
NT seq
+upstream
nt +downstream
nt
atggggaaacgcaagcagcatcaacagttaccgaaaatagcagatcacgtatctgaatcg
gaggatgaggaaatcgaggaggacgaagcgttcaattcagaagatgaacgcaaatacggc
ggattcttcgaacgaggtttagcaccagaatcttccaagacagcaacagtcgatagtgac
gccgaatcggaagaagatgaggatagcgacaatatagcagatagaaacgggtcggaggaa
ggcgatggaggtcaatatatgcttgatatgctcgatatacttggtgaagacagctccaaa
aagaactcgagagaaatcaaaacacctcaaatggcaatcagtgtcaaagaatccgagttt
tctgcatcggtcttgccatcggcaaaccttacgctagactcactgatgaagggattggag
gacaccaaaggattcggagtggttcaaaaaaccatgaagaaaattgcgcagggccatgcc
acggcggcaccggttgcccgtgttgtttccgagcgtgcgcaacgcaaggttcactatgag
cagcaaacgaaagaagttgataaatggattgacgcggtgcaggaaaatcgacaggcagag
actctagattttcgcccgaaagaacgattagagatttcccgtgacgtcttggtggacaag
tttgtgccgacgaccgatttcgaaaagcaacttcacgaagcgttacaagaagccgggcaa
ctagacgaagaagatatgctcagggcggaagaacgggctctacaggatgaccttggtgcg
aatgagattaccatggaagaatacaagcagagaagagggcaactcgccaagatgcgtgct
ctcatgttctatcacgaacaaaagcgccaccatatgaacaagataaaatcgaagaaatat
cgtcgaattcggaaaaagcaacgccttcgcgggaaagaaggcgaactagaagccgaaatg
gaggagaaccctgatcttgtccgagagcttcaggagaaagaagaagttgaccgaatgaag
gaacgaatgacgctcgctcacaaaaatacaagcaaatgggcgaggcggatcttgaagcga
ggcaaaaacgttgatgttgatactagacgagccttgtccgcacagaataaacgcggagac
gaacttttaaagaaaatgtattcaggatcaggcgaggaagacggagatgactcagacagc
gaagatctcatcgaagcggctaggaaagttctgcaagatacagaagaagaagaagttgca
gggtcttctaaaggcaaagggctcctgaacttatcctttatgcaacggggaattgaaaag
cagcgggaaaaagccaaagaagaggctcgtcagcttttgctcgaattggaggcaaacgag
cgtatcgaaacaagcgacaatgatggtgacactaatatgaactcaaaaaagaagaagaga
gtcgccggcgctgctgagatgaaggctgtactcaaggagggagcgcttgttgtttcttcc
cttcaaactggcggttcagctagtgtagccatgagtggtggcatagacatcaattctgac
ttcgcagatcagaatgaagcaaagatgtcaagctacgccagtgaacatactgcggccctc
tcattgggaaattcgcctaaatacattcagccaaggcaacttgtgaagccgatggagaaa
aagggctcaaacacacaggatctctgcccacaacccgataacgaagtaaatccctggcta
cttttgaaatcacagggaaacgaagtctcagatactgctagcatgacatccagaccggga
ataggtgccaaactatcgttatcaaatcaagcgttggtgattgaccctgagaaagcggtt
tatatgatggaacagaaaggagacacggagctttctgtaaataagatattcacgaacgat
gttgtgacctcgacggagaagaaaataactatgctcacacaagaagaattggtgagaaag
gcgtttgcggctccgtcggacaaggaaattgaagaagaatttgcaaacgaaaaagatgcc
attcaggactctgaagaccctactcgcacaagaaagaaagataagctttcgaatacagtg
tcgggatggggttcttggactgggaagggagcccctccacctaagcctccgaaaaagatt
ccaaggcacttgttgcctcctgaacagaagctttcgaaaagaaaacgtgaagatgctacg
aagccaaatgtgatcatcagcgaaaagcggataaggagaaccgccgacaagtttatgata
tcacagattccgtatccgtacacttcgcgtgaggagtacgaacgagccatggttgggggg
ttaggaagggagtggaatgttacaagcagcatgaaagacatgacacgtccagaaatcatg
actcgatcgggcaaagtgattcagccaatttcgaagaaagtgaagcaaaaacgcccagct
gcaagattttag
DBGET
integrated database retrieval system