Phaeodactylum tricornutum: PHATRDRAFT_50465
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Entry
PHATRDRAFT_50465 CDS
T01075
Name
(RefSeq) hypothetical protein
KO
K10696
E3 ubiquitin-protein ligase BRE1 [EC:
2.3.2.27
]
Organism
pti
Phaeodactylum tricornutum
Brite
KEGG Orthology (KO) [BR:
pti00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pti04121
]
PHATRDRAFT_50465
Enzymes [BR:
pti01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
PHATRDRAFT_50465
Ubiquitin system [BR:
pti04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
BRE1 proteins
PHATRDRAFT_50465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_3
zf-C3HC4
zf-C3HC4_2
MscS_porin
zf-RING_2
zf-RING_5
THR4_C
Prok-RING_4
PRRSV_Env
Motif
Other DBs
NCBI-GeneID:
7199315
NCBI-ProteinID:
XP_002185386
JGI:
50465
UniProt:
B7GE72
LinkDB
All DBs
Position
30:140844..145029
Genome browser
AA seq
989 aa
AA seq
DB search
MKRALAERAKQSLPAGDSSTRSGNSRTPSPTQPPGKLARYEGNHAHHHHRNNNNNNNNSN
HNLHHSNHHDVPHESDPTTIGVQNSALATPHPNPVVPEFSSRTQTPPFSTTTIALPTPPM
DLSSGTLHRTRSPSPRPSTTGSSSTHGIATLKRQRLPASRHADQDDGDDDHTGSAFYLRQ
QNKALATELRTLQALTRTLTVERDHRRRICHQAVQALDSLQATWTQLETSLRINVTGTTV
STHPNGWQTALSTPSLTASGDAPPSTLPLPQHPGAEEERSPILSVEWTKALTQALTSLGT
TPSAVDTFQASGDDWSTVATNVAARAAVLQEAILQKQQSRDDSGTPILSLATAPPEFVHE
LERYRAQTQTLQAQIAELADARERVTIRERQTRRDIYRLASGLLTSAQLVARFDSTDQAV
DDDLDLAALQASVRAETRPASPPPPTPTDAPSTGISDAQMAALQAQLQDARQQVAARETS
LQELTTKWQDAELRVNALSTKQLTETDTRQLESLASTLEKYRVVESESRSLEAQIVRLRS
EWAQARGNDEAARQSMEDLQSKHRKRWAELASLLATGAPTNEDVKSPEVADPIAEADFET
LRDILTGSRTIVELRHKLNQALGHVRQVETVRDNLRDALVMNETLKQKVDEYRAKANAAI
ASQATKSPPSSRHGEAGISSAAKEKESEKPATEKPSSSSNHDKSDKMHREFRRMRKDLAT
LTTSKDAAKAKLERSEREKETLLDANSRFLQQIAEKDEMNAKSLSTILHLKQMTEQLSSE
RDILEQQVKSASQLALAARLATNAKERVSEELVKERLTLDKRVNELEIQLALLNKDLAQK
TVECSEATGRMSITKAELEKVLARNNELVEEAEKRETDIRGLVDSANKAEREAREAKGKL
DNLTQQSGGDLSAASSSSTVNQLNTQISVLKSRLACPVCHYRDKECIIMRCRHMHCKQCV
EERISNRSRKCPTCNNKFSDKDVEDIWLS
NT seq
2970 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgtgcgttggcggaacgtgccaaacaatcattgccggccggagactcctcgact
cggtcgggcaacagtcggactccgtcaccaactcaacctcccggcaaactcgcccgctac
gaaggcaaccatgcgcatcaccaccaccgcaacaacaacaacaacaacaacaacagtaac
cacaacctccaccacagtaaccatcacgacgtcccacacgaatccgaccccaccaccatt
ggtgtgcagaattccgcactcgctacaccccatccgaaccccgtcgttccggaattttcc
agccgtacacagacaccaccattttccacaaccacaatagcactccccacgccaccgatg
gatttatcgtcgggtacgttgcaccgtacacgttccccgtccccccgtccgtccactacg
ggatcgtcgtccacgcacgggatcgcaaccctcaaacgtcaacgactaccggcatcccgt
cacgccgaccaggacgacggtgacgacgatcacaccggatccgccttttacttgcggcaa
caaaataaagccttggcaacggaacttcgcaccttgcaagcgctcacgcgcacgttgacc
gtggaacgcgaccaccgacgccggatctgtcaccaagccgtacaagcactcgacagttta
caggcaacctggacgcaattggaaacatcgttacggatcaatgtcacaggtacaaccgtg
tctacacaccccaacggctggcagactgcgttgtccacgccgtcgctgactgcgagtggt
gacgctccccccagtaccttgccgttgccccagcatcccggagcggaagaagaacgctct
cccattctatccgtggagtggactaaggccttgacacaagccttgacttcgctcgggacg
acgccgtccgcagtcgacacttttcaagcatccggggacgattggtcgaccgtggccacc
aacgtggccgcgcgggccgctgtattacaagaagcaatcctccagaaacaacagtcacgg
gacgattccggtacgccgatcttgtcgctcgccaccgccccgcccgaatttgttcacgaa
ttggaacgctaccgcgcacaaacccaaacgctgcaagctcaaattgccgaactcgccgac
gctagggagcgcgtaaccatccgcgaacgacaaacccgacgcgacatctaccgactggcg
tcgggattgttgacgtccgcccaattggtggcccgctttgactctacggaccaagccgtg
gacgacgatttggatttggcggccctccaagcgtccgtgcgcgccgaaacacgacccgcg
agtccaccgccgccgactccgacggacgctccatccactggtatttccgacgcgcaaatg
gcagctctgcaagcgcaactacaagacgcccggcagcaagtggccgcccgcgaaacgtcg
ctgcaagagttgacgacgaaatggcaagatgcggaattgcgcgttaacgcattatcgacc
aaacagctcaccgagacggatacgcggcaattagaatccctggcgtcgactctggaaaag
taccgggtagttgagtccgaatctcggtcgttggaggcccagattgtgcgtttgcgatcg
gaatgggcgcaagcacgaggcaacgacgaagccgcgcggcaaagcatggaggatctccaa
agcaaacaccgtaaacggtgggcggaactcgcaagcttgctcgcgacgggcgcgccaacc
aacgaggacgtcaaatcccctgaagtggccgatcccattgctgaagccgattttgagact
ctacgagatattttgaccgggtcccgcacaatagtggaattgcgacataaactcaaccaa
gcactgggacacgtgcggcaggtggaaacggttcgtgacaatctgagagatgcgttggtg
atgaacgaaacattgaaacaaaaagtggacgagtacagggcgaaagccaatgccgctatt
gcttcccaagcaaccaagtcgccgccatcgtcccgacacggcgaagccgggatttcttcc
gccgccaaggaaaaggaatcggaaaagcctgcgacggaaaaaccatcgtcgtcgtcaaat
cacgacaaatccgacaagatgcatcgggaattccgtcgtatgcgcaaggatttggcaacc
cttacgacaagtaaagatgccgccaaggcaaaactggaacgttccgagcgggaaaaggaa
actcttttggatgcaaatagcaggtttcttcaacagattgcggaaaaagatgaaatgaac
gccaagtcgctgtctacaattcttcatttgaagcagatgacggagcaactgtcgtccgaa
agggacattttggagcagcaggtgaagagcgcaagtcaattggcattggcagcaaggctg
gcaacaaacgccaaggaacgtgtgtccgaggaactcgtcaaagagcgcctgaccttggac
aagcgcgtcaacgaattagaaatacagctagcgttgctgaacaaagacctggcgcagaag
actgtggaatgttcggaagcaacaggaagaatgtccatcaccaaagcagagctcgagaag
gtgttggccaggaacaatgaactcgttgaagaggctgagaagagagagactgacattcgg
ggactggtagatagcgccaacaaagccgagagagaggctcgagaagcaaaagggaaactc
gataatttgacacaacagtccggcggagatctgagcgctgcatcttcctcgtccactgta
aatcaattgaatacccaaatttctgtcctgaaatctcgattggcgtgtccagtttgtcac
taccgagacaaggaatgcatcatcatgcgctgtcgacacatgcattgcaaacagtgcgtt
gaggaacgtatttcgaaccgaagccggaagtgtccaacttgcaacaacaagttcagtgac
aaggacgtggaagatatttggttgagctaa
DBGET
integrated database retrieval system
