Phaeodactylum tricornutum: PHATRDRAFT_50645
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Entry
PHATRDRAFT_50645 CDS
T01075
Name
(RefSeq) hypothetical protein
KO
K06269
serine/threonine-protein phosphatase PP1 catalytic subunit [EC:
3.1.3.16
]
Organism
pti
Phaeodactylum tricornutum
Pathway
pti03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pti00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
PHATRDRAFT_50645
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pti01009
]
PHATRDRAFT_50645
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pti03021
]
PHATRDRAFT_50645
03019 Messenger RNA biogenesis [BR:
pti03019
]
PHATRDRAFT_50645
03041 Spliceosome [BR:
pti03041
]
PHATRDRAFT_50645
Enzymes [BR:
pti01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
PHATRDRAFT_50645
Protein phosphatases and associated proteins [BR:
pti01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
Catalytic subunits
PHATRDRAFT_50645
Transcription machinery [BR:
pti03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
PHATRDRAFT_50645
Messenger RNA biogenesis [BR:
pti03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
PHATRDRAFT_50645
Spliceosome [BR:
pti03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
PHATRDRAFT_50645
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
STPPase_N
Motif
Other DBs
NCBI-GeneID:
7196666
NCBI-ProteinID:
XP_002177031
JGI:
50645
UniProt:
B7FRF1
LinkDB
All DBs
Position
1:complement(161684..163199)
Genome browser
AA seq
332 aa
AA seq
DB search
MADDAAGDANGGALLSDPVDVIIDKLLSVRGARPGKQVDLSEAEIKMLCLRSRDLLIGQP
MLLELEAPIKICGDVHGQYYDLLRLFEYGGFPPESNYVFLGDYVDRGKQSLETICLLLAY
KIKYPENFFVLRGNHECASINRIYGFYDECKRRFGIKLWKTFTDCFNCLPCAAVIDEKIF
CMHGGLSPELTSLDQVKRIVRPTDVPDTGLLCDLLWSDPDKEIDGWGENDRGVSFTFGED
IVAQFLHKHDLDLICRAHQVVEDGYEFFARRQLVTLFSAPNYCGEFDNAGAMMSVDETLM
CSFQILKPAEKRQRFSYQGGTQGRQGTPQAGK
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atggctgatgatgccgcaggagatgctaatggcggagctttactaagcgatcctgttgat
gttatcatcgacaagttactgagcgttcgtggtgctcggcctggaaagcaagtagatctt
tccgaagcagagatcaagatgttgtgcctccggagccgcgatcttctcatcggacaaccg
atgctcttggaattggaagcaccgatcaagatttgtggtgacgtacacgggcagtactac
gatctgcttcgccttttcgaatacggtgggttccccccagagtccaactacgtctttctc
ggagattatgtggatcgtggaaagcagagtctggaaacgatctgcctgctgttggcatac
aagatcaagtaccccgagaatttttttgtcctccgtggaaaccacgaatgcgcctctatt
aatcgaatctacggtttctatgatgagtgtaaacgacgcttcggtattaaactctggaag
acttttaccgattgcttcaattgtcttccttgtgctgccgtgattgatgaaaagatcttt
tgcatgcacggagggttaagtcctgaactcaccagcttggaccaagtgaaacgcattgtt
cgacctaccgatgtcccggataccggtttgctctgcgatcttctttggtcggatccggat
aaggaaatcgatggatggggcgagaacgatcgaggtgtctcgtttacctttggggaagat
attgtcgctcaattcctgcacaagcacgatttggatttgatttgccgcgcgcatcaagtc
gtggaggatgggtatgaattctttgcccgccgacagctcgttacattattttcggcgccc
aactactgcggtgaattcgataacgccggtgccatgatgagtgttgacgagacgctcatg
tgcagtttccagattttgaaaccggctgaaaagaggcagaggttctcctaccagggtggt
actcagggaagacaaggaacgccccaggcaggcaagtag
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