Phaeodactylum tricornutum: PHATRDRAFT_51245
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Entry
PHATRDRAFT_51245 CDS
T01075
Name
(RefSeq) carboxylase propionyl-coa carboxylase
KO
K01965
propionyl-CoA carboxylase alpha subunit [EC:
6.4.1.3
]
Organism
pti
Phaeodactylum tricornutum
Pathway
pti00280
Valine, leucine and isoleucine degradation
pti00630
Glyoxylate and dicarboxylate metabolism
pti00640
Propanoate metabolism
pti01100
Metabolic pathways
pti01110
Biosynthesis of secondary metabolites
pti01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
pti00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
PHATRDRAFT_51245
00640 Propanoate metabolism
PHATRDRAFT_51245
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
PHATRDRAFT_51245
Enzymes [BR:
pti01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.3 propionyl-CoA carboxylase
PHATRDRAFT_51245
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
Biotin_carb_N
Biotin_carb_C
Biotin_lipoyl
ATP-grasp
PCC_BT
Dala_Dala_lig_C
ATPgrasp_ST
HlyD_D23
Motif
Other DBs
NCBI-GeneID:
7198785
NCBI-ProteinID:
XP_002184830
JGI:
51245
UniProt:
B7GCL6
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All DBs
Position
26:126584..129045
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AA seq
664 aa
AA seq
DB search
MWQAILIANRGEIVERVIKTCHELEIETVAVYSTADAKAPFVSKATQSICIGPAAANKSY
LQPDNILQAMSISGAQALHPGYGFLSENAQFAQAVLDAGHVWLGPSPSCVHQMGDKLESK
AVAVQAGVATVPGHDGVVETLSQALQLCNETIGYPVLLKALAGGGGKGMRVCYNDQDVKD
AWTVSKAEALSFFNNDQLLLEKFIERPHHIEFQVLCGRKENGDLDVVVFPERECSIQRRN
QKVIEESPSCLLTPETRQTMAEQVVRLCQATQYQSAGTVEFLVDEEQNFFFLEMNSRLQV
EHPVTEAITGVDLVKGMLYVGAGWPLPDEFQRDGIIMPHKGHAVEARIYAEDPLRGFLPS
TGPLSPYVEPSSAQNTPESYVRVESGVATGHLVSPYYDPMLSKVIYYDQTRAGAIAGLSQ
ALDEYVIESVQHNARLVQSVLREPEFLKGNTPTSFLPTHYPDGFKGVKLGTSDLQELAAA
AAVISDVRRTHFDRPSLGGQPNNSEVVVEQYLCDMTIDGVSRSVQVLGESNEGELKLQMY
GADVIVTIQSEREYELSAHMHEPLKIDTSSLILSPMPGTLISYAVDEGDYVEEGQELCVV
EAMKMQNLIRAPRAGTIGKCKVTVGNSLQADQLIMEYAKDDIHEAAAQALLAQKTNVVAG
QDHL
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atgtggcaggcgatcctcattgccaatcgcggtgagatcgtcgagcgagtcatcaagacg
tgtcacgaactagaaatagaaactgtcgctgtctactcgaccgccgacgccaaggctccc
ttcgtcagcaaggccacacaatccatctgtataggcccagctgccgccaacaagagttac
ctccaacccgacaatatcctccaagccatgtccatctcgggcgcacaggccttacacccc
ggctacggattcttgtccgaaaacgcccagtttgcccaagcggtactggacgccgggcac
gtgtggctcggaccgtccccctcctgcgtgcaccaaatgggcgacaagctggaaagcaag
gccgtggccgtacaggccggtgtcgctaccgtgccgggccacgatggtgtcgtcgagaca
ctgtcacaagccctgcaactgtgtaacgaaacgattggataccccgtacttctcaaagct
ctggcgggaggtggcggcaagggtatgcgcgtctgttacaatgatcaagacgtcaaggac
gcatggaccgtttccaaagccgaggctctcagctttttcaacaatgaccaactcttgctg
gaaaagttcattgaacgtccacatcacattgaatttcaagtgctttgcggtcgcaaggaa
aatggcgacctggatgttgtagtctttcccgaacgggaatgcagtattcaacgacgcaac
caaaaagtgatcgaagaatcgccgtcctgtttgttgacgcctgaaactcgccaaactatg
gcggaacaagtcgtccgtctctgccaagccactcagtaccagtctgctggtacggtcgaa
ttcctcgtcgacgaggaacagaattttttctttctagaaatgaattcgagactccaagtc
gagcatcccgttaccgaagctatcaccggtgtcgatctcgtcaaaggaatgctctacgtc
ggcgctggctggccgcttcccgacgaatttcagcgcgatggcatcatcatgccacacaaa
ggacacgcagtcgaggctcgtatctacgccgaggatccgctccgtggattcctgccttcc
accggaccactttctccttacgtcgaaccatcttcggctcaaaatacgccagaatcatac
gtgcgagtcgaatccggggtggctacgggacatcttgtcagtccctattacgatcccatg
ctcagcaaggtaatctactacgaccaaacgcgcgccggggccattgccggtctctcgcaa
gccctcgacgaatatgtcattgaaagtgtccagcacaacgcccgtctagtccaatcggtc
ttacgcgagccagagtttctaaagggcaataccccgacttctttcctgccgacgcattac
ccagacggttttaaaggagtaaaactcggcacatccgatttgcaagaactcgcggccgcg
gcggctgttatttccgacgttcgtcgaacgcatttcgaccgacccagtttggggggacaa
ccaaataactcggaagttgtcgtggagcaatatctgtgtgacatgaccatcgatggagtc
tcccgcagtgtccaagtgctgggtgaatccaacgaaggtgaactcaagttgcaaatgtac
ggcgccgatgtaattgtaacgatccaatcagaacgggaatatgaacttagtgcccacatg
catgagccactgaagattgatacaagttctttgattcttagtcccatgccagggacatta
atttcatacgctgtcgacgaaggcgactacgtggaagaaggccaggagctatgtgtcgta
gaagctatgaagatgcaaaatctgatccgcgcgccacgagcagggaccatcgggaagtgc
aaggtaactgtgggcaattccttgcaggccgaccagctgattatggaatacgccaaggac
gacatacacgaagcagcagcgcaggccctgctggcgcaaaagacaaacgtcgtggcaggc
caagatcatttgtag
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