KEGG   Phaeodactylum tricornutum: PHATRDRAFT_51283
Entry
PHATRDRAFT_51283  CDS       T01075                                 
Name
(RefSeq) hypothetical protein
  KO
K12831  splicing factor 3B subunit 4
Organism
pti  Phaeodactylum tricornutum
Pathway
pti03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pti00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    PHATRDRAFT_51283
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pti03041]
    PHATRDRAFT_51283
Spliceosome [BR:pti03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    PHATRDRAFT_51283
 Complex B
    PHATRDRAFT_51283
 Complex C
   U2 SnRNP specific factors
    PHATRDRAFT_51283
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_5
Other DBs
NCBI-GeneID: 7199211
NCBI-ProteinID: XP_002185349
JGI: 51283
UniProt: B7GE03
LinkDB
Position
29:complement(258347..259408)
AA seq 328 aa
MASLAVVEHRNQDATVYVGNLDQACSEELLTELFSQVGRVASVYMPKDKLSGQHNGYGFV
EYLDAVDADYAMTILHMMKLFGRPVRVSKSSLNDEEGRHSRDIGANLFIGNVDPIDVNEQ
LLYETFTAFGTLVRTPNIARDEATQQSKGFAFLSYDSFQAADMAIELMNGQYLGNRQIQV
NYAWKKDANGNITNERHGSRAERMLAEAKRANQQLGPSGPTLFRPNSTFASTGQQSTGSF
LPPPPPPPLSSMPPPPPPLPPLAGSAIPPPPPPPPPLPQTAAGVPPPPPPPIVKTLPPPP
PPPPITETLPPPSHGAFLPPPPPPPPSF
NT seq 987 nt   +upstreamnt  +downstreamnt
atggcttcactggctgttgtcgagcacagaaatcaggatgcgacagtttacgttgggaac
cttgaccaagcttgttcggaggagctcctaacggaactctttagtcaagtcggacgagtg
gcctcagtttacatgcccaaggataagctttcggggcaacacaatggctatggttttgtg
gaatatctcgacgccgttgatgccgattacgccatgactattttgcacatgatgaagcta
ttcggaaggcctgttcgagtgagtaaatcgtcactgaatgatgaagagggccgtcacagt
cgcgatatcggtgcaaacttattcatcggaaacgtggatccaattgatgtgaacgagcag
ctactgtatgaaacgttcactgcatttggaactttggttcgaacgcctaacatcgcccga
gacgaagccactcagcaatcaaaaggttttgcgtttttgtcgtacgattcgttccaagcc
gccgacatggcaatcgagttaatgaacggacagtatcttggaaatcgacagattcaagta
aactatgcgtggaaaaaagacgccaacggaaatattaccaacgagcggcacgggagtcga
gcagagcgcatgttggcggaagcgaaacgggcaaatcagcagctggggccgtcaggaccg
acattatttcgaccgaactccacctttgcgtctactggtcagcaatcaaccggatccttt
ctaccaccgcctccgccacctccgttatcaagtatgcctccgcccccgccccctctccct
cctttggcaggatctgcaattcctccaccaccaccgcctcctcctccacttccgcaaact
gctgccggtgttccaccgccacctccgccacccattgttaaaactctcccaccaccgcca
ccaccaccccccatcacggaaacgctcccaccgccgtcacacggggcgttcctgccacct
cctcctcctccgccaccaagcttttag

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