Phaeodactylum tricornutum: PHATRDRAFT_52174
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Entry
PHATRDRAFT_52174 CDS
T01075
Name
(RefSeq) hypothetical protein
KO
K03164
DNA topoisomerase II [EC:
5.6.2.2
]
Organism
pti
Phaeodactylum tricornutum
Brite
KEGG Orthology (KO) [BR:
pti00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pti03032
]
PHATRDRAFT_52174
03036 Chromosome and associated proteins [BR:
pti03036
]
PHATRDRAFT_52174
Enzymes [BR:
pti01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
PHATRDRAFT_52174
DNA replication proteins [BR:
pti03032
]
Eukaryotic type
DNA Topoisomerases
PHATRDRAFT_52174
Chromosome and associated proteins [BR:
pti03036
]
Eukaryotic type
Chromosome condensation proteins
Other regulators of chromosome condensation
PHATRDRAFT_52174
Centrosome formation proteins
Centriole proteins
PHATRDRAFT_52174
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
TOPRIM_C
DNA_gyraseB
HATPase_c
Toprim
HATPase_c_3
Motif
Other DBs
NCBI-GeneID:
7202040
NCBI-ProteinID:
XP_002181228
JGI:
52174
UniProt:
B7G2L6
LinkDB
All DBs
Position
12:566051..569924
Genome browser
AA seq
1143 aa
AA seq
DB search
KKKTVEETYQKMSQLEHILIRPDTYIGSVEPHTKLMFILEDDKIIEKEITYTPGLFKIFD
EIVVNAADNKQRDPNMDKLDVTINAEENVISIQNNGKGIPIVMHKEHGIYVPELILGHLL
TGSNFDDGERKTTGGRNGYGAKLANVFSTEFVVECADTENGLKYRQVFRENMKQKDKPVV
KALTAKEMKAADYVKITFSPDLERFKMDRLDEDTVGLLSKRAYDIAGTMSQSSGKKLLVS
LNGKKLPIKSFKDFIGVFEGINKPSAFETVRLANSDRWEVGVAASDDAAMKQVSFVNSIS
TSKGGTHVQYIADQVASHLAKAITKKNKKGGEVKASFIKNHLAIFVNCLIENPAFDSQTK
EFMTSKPKDFGSTCKLSDSFLKKLEKSAIVENVLAFSQFRDRQALKNKSGKKKAKLTGID
KLDDANFAGTAKSKDCTLIITEGDSAKSLAMAGLSVIGRDYYGVFPLRGKPLNVRDAPIK
AVTSNEEIKNVVEIMGLKFQTVYDETNIKQLRYGHLMIMADQDNDGSHIKGLIINFIHNF
WPSLLDIPGFLQQFITPIVKVSKGQKSQSFFNLPEYENWLESTGKNGHGWKIKYYKGLGT
STSAEAKEYFSNLDLHEVLPDTVQSGNDLIDMVFRKNRVEDRKQWLNAIAKDTFLNYSEV
SKEGVMYSEFINREYILFSKSDNERSIPHLLDGFKPSQRKILFACFKRKLKGEIKVAQLT
GYVAEHSAYHHGEASLQATIVNMAQNFCGSNNINLLTPSGQFGTRRMGGKDAASARYIFT
KLEPITRAIFHPDDDELLSYINDDGVTVEPEYYVPVIPMILVNGADGIGTGWSTSVNNYN
PREIVRNLRRKIAGEDFVAMAPFYSGFKGEIIPVDSNSRRSGSYDMLGKVERINDTTIII
SELPVRKWTQDYKAFLEIMLTGDGKKKLPEIKDFTENHTETTVSFTIIAEKEKIDEFEKE
KAGLMGKFKLTGSLSTSNMTLFDERGRITRFEDPESIMNAFYDIRLDFYDKRKRLLVKKL
KEEQRKLSNKARFVEEVCRVELVVNNRKRQDILHELRNRGYETFGADARSKETSDSDGEE
DSINESQSDAELARGYEYLLGMKIWSLTFEKAEELRRKLGEKTTELNALQGTSPSELWLN
DLD
NT seq
3431 nt
NT seq
+upstream
nt +downstream
nt
aaaaaaaagacggtcgaggaaacttatcagaaaatgtcgcagctcgagcatatcctcatt
cgtcccgacacctacatcggctcagtggagcctcacaccaagctcatgtttatcttggag
gacgataagattatcgaaaaagaaatcacctacactccaggtcttttcaagatttttgac
gaaattgttgtcaacgcagcagataacaaacagcgcgacccgaacatggataagcttgat
gtgactataaatgccgaagagaatgtcatttctattcagaacaacggaaaaggtattcca
atcgtgatgcataaggaacacggcatttatgtgccagaactcattctaggacaccttttg
acgggctccaactttgatgacggagaaaggaaaacaacaggtggacgaaatggatatggt
gccaaattagcgaacgtatttagcacggaattcgtcgtagaatgtgcggatacggaaaac
gggctcaagtaccgccaggtatttcgagaaaacatgaagcaaaaggacaaaccagtagtc
aaggcgctcacagccaaagaaatgaaggctgcggactacgtcaaaatcacctttagtccc
gatttagagcgcttcaaaatggatcgtttggacgaagacacagtcggtctcctgtccaaa
cgtgcctacgatattgcgggaaccatgtctcagagcagtggcaagaaacttctcgtctcc
ctcaatggcaaaaaacttccaattaagtctttcaaagatttcataggcgtatttgaggga
attaacaagccgtccgcgttcgaaacggtacgtcttgcaaattctgatcgctgggaggtt
ggtgttgccgcttccgacgatgcggcgatgaaacaggtttcgttcgtcaactcgatttcg
acgtccaaaggaggcacccacgttcagtacatcgcagatcaagtggcctctcacttggcc
aaagccattaccaagaaaaacaagaaaggtggggaggtgaaggcgtcgtttatcaaaaat
catttggcgatttttgtcaactgtttgatagaaaatcccgccttcgacagccaaaccaag
gaattcatgacgagcaaacccaaggactttggttccacctgtaagctctcagacagcttc
ttgaaaaagctcgagaaaagtgcaatcgttgagaatgtactagcatttagtcagtttcgg
gatcgtcaagccttgaaaaacaaaagcggtaagaagaaggccaaactcactggtatcgac
aagctcgatgacgccaactttgcagggacggcaaagtcaaaagattgcactctcatcatc
acagagggagactcagccaagtcgttggccatggcgggcttatcagtcattggacgtgac
tattacggagtctttccccttcgtgggaaaccattgaacgtccgtgatgctcccatcaag
gccgtcaccagcaacgaagagatcaaaaacgtggttgagataatgggtctaaagtttcag
acagtgtacgatgaaacgaatatcaagcaactccgttatggacatttgatgattatggcg
gatcaggataatgatgggtcacacatcaagggtttgatcattaattttattcacaacttt
tggccgagcctgctcgatattcctggattcctccaacagtttatcacaccgattgtcaag
gtatcgaaaggccaaaaatcccagtcgttttttaatttaccagagtacgagaattggctg
gaatcaacgggaaaaaacggacacggatggaaaatcaagtactacaaagggttgggaact
tcaacgagcgctgaggcaaaggagtacttttccaatttagaccttcacgaagtccttcca
gacacagtgcagtctggcaatgacctcatcgacatggtttttcgcaaaaatcgtgtggaa
gatcgcaaacaatggttgaacgccattgctaaggatacgttcctcaactattcggaagta
tccaaggaaggggtaatgtattcagaatttatcaaccgtgaatacattttgttttcaaaa
agtgataacgaacgctctatacctcatctattggatggctttaagccatctcagcgcaaa
atcctcttcgcatgctttaaaagaaagctgaaaggcgagataaaagttgcccagctcacc
ggctatgtcgccgagcattcggcgtatcatcacggtgaagcgtcgctccaagccacaata
gtgaacatggctcagaacttttgtggttctaacaacatcaatcttctcacgccgtctggt
caattcggtacgcgtcgaatgggtggcaaggatgctgcctcggctcgatacattttcacc
aaactcgagccaatcacaagagccatctttcatccggacgacgacgagctcttaagctac
ataaatgacgacggtgtgaccgtcgagccagagtattatgtacccgtcatccccatgatt
ctcgtcaacggagctgatggaattggtacgggctggtccacgtcagtcaataactataat
ccaagggaaattgtacgcaacctgcgccgtaagattgctggtgaagattttgtcgcaatg
gcgcccttttacagtggcttcaaaggcgagattattcctgttgattccaactcccgccga
tctggatcgtacgatatgcttggcaaagtcgaacgcatcaatgacacaacgatcattatc
tctgaattacccgttcggaaatggactcaagactacaaagccttccttgagatcatgttg
actggcgacgggaaaaagaaactaccagagatcaaggattttactgagaatcacactgag
acaactgtctcattcaccatcattgccgagaaagagaaaatcgacgaatttgagaaagag
aaagccggcttgatgggtaaatttaagttgactgggtcgctctctacttcgaacatgacg
cttttcgatgaaagaggaagaatcacaagattcgaagatcctgaatcgattatgaatgct
ttctacgatatccgtctagacttctacgataaacgaaagaggttgctggtcaaaaagctg
aaagaggaacaacgaaaactctccaacaaagccagattcgtggaggaagtgtgtcgtgtg
gaacttgttgtcaacaatcgtaaaagacaggacattctacacgagcttcgaaatcggggc
tatgagacttttggggcagatgcacgttcgaaagagactagcgacagcgatggcgaggag
gattctatcaatgagagccagtccgacgctgaactcgctcgagggtatgagtacctcctt
ggaatgaaaatttggtcgctgaccttcgagaaagctgaggagctgcgacgtaagcttggt
gaaaaaactacggaactcaacgcgttgcagggtacttcaccttctgagttatggttgaac
gacctggatga
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