Phaeodactylum tricornutum: PHATRDRAFT_52561
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Entry
PHATRDRAFT_52561 CDS
T01075
Name
(RefSeq) hypothetical protein
KO
K10737
DNA helicase MCM8 [EC:
5.6.2.4
]
Organism
pti
Phaeodactylum tricornutum
Brite
KEGG Orthology (KO) [BR:
pti00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pti03032
]
PHATRDRAFT_52561
03400 DNA repair and recombination proteins [BR:
pti03400
]
PHATRDRAFT_52561
Enzymes [BR:
pti01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PHATRDRAFT_52561
DNA replication proteins [BR:
pti03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
PHATRDRAFT_52561
DNA repair and recombination proteins [BR:
pti03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
PHATRDRAFT_52561
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MCM
MCM_lid
MCM_OB
Mg_chelatase
AAA_5
WHD_MCM8
Sigma54_activat
AAA_3
AAA
RuvB_N
AAA_16
AAA_19
Motif
Other DBs
NCBI-GeneID:
7195822
NCBI-ProteinID:
XP_002184232
JGI:
52561
UniProt:
B7GAP8
LinkDB
All DBs
Position
22:complement(<330257..>332441)
Genome browser
AA seq
675 aa
AA seq
DB search
MALAIVNAYAQKQQHQQQSTTDEHCTSYETEVDRFIGSTQIHVRFVHVQPTVQMMDIKTG
LVGKLLTVQGHVVKARPKRLRIATADFACGKCGVLVTHAFTAGRYSLPTRCSGTSCTSRT
FSLVRPTTRYTNVQELRLQEAQEESISHAGRTPRQLVVECVQDLVDVCRPGDLVMLAATV
AAVNTAVAAGKTGKRAQETSTYQLFLQAHSITTLSERGSRSQTSKTTAQVVYTSQQLQAI
TQLCHADHRYFGLPERRAFPFDLLVRSLCPSIIGHDEVKAGLLLCLLGGTPPSSSGGGMD
KGQSIRSNSHILIVGDPGMGKSQMLLAACQLAARSVYVGGNTSSTTGLTVTLTKEEGGES
GIEAGALVLADQGVCCIDEFDKMAKNHQDGLLEAMEQQQVSIAKAGVVASLPARCSLIAA
ANPKHGSYNMNKTVAENLNMAKPILSRFDLVYILRDRANKEQDRMVSSNIMNLYRNGSNN
NPLMHSDIDLSQRVMTAGNGKVRDYIAYAREYCKPKMTAEAATVLKDFFMDLRYPADGGR
RPRDTVPITTRQLEALIRLCQARAKACLRDFVLKEDALDVVELMSKSVEQVHRDESGVLD
PIRGGAGGKSNKKMKKAFVQEMQRLIGAGAECSLDDLRRIADKVNCGLSEFQPLVEDLRS
NGIILRKSNGNYQIL
NT seq
2027 nt
NT seq
+upstream
nt +downstream
nt
atggctctcgccattgtcaacgcgtacgcacaaaaacaacaacatcaacagcaatcaaca
accgacgaacactgcacgtcgtatgaaacggaggtagatcgctttatcggctcgacacag
atccatgtgagatttgtgcacgtccaaccaactgttcaaatgatggacatcaaaacaggc
ttggtgggaaagctcttgaccgttcaaggccacgtcgtcaaagcacgtcccaaacgactg
cggatcgccaccgccgactttgcgtgcggaaagtgcggagtactcgtcacgcacgccttt
actgcaggacggtactcgctcccaacccgttgcagtggaacctcctgtaccagtcgcact
ttctctttggtccgtcccaccactcgctacaccaacgtccaggaactgcgtttgcaggaa
gcccaggaagagtccatatcacacgcgggacggacaccccgtcagctagtggtcgaatgc
gttcaggatttggtggacgtgtgccggcccggagatctcgtcatgctggcggccaccgta
gccgccgtcaatacggccgtggccgccggaaaaacaggtaagcgcgcacaagaaacctct
acgtaccaactctttctgcaagcacactccattactacgctctcggaacgagggagccga
tcacaaacgtccaaaacgaccgcgcaagttgtgtatacctcacagcagctgcaggccatt
actcaattgtgtcacgcggatcatcgatactttggcttgcccgagcgacgggccttcccg
ttcgatctactggtgcggtcattgtgtccttctattatcggacatgacgaagtcaaggct
ggactcctcttgtgcttgctagggggaacaccgccgagtagttctggaggaggaatggat
aaggggcagtcgatccgttcgaattcacacattctgattgtcggtgatccaggtatgggt
aaatcgcaaatgcttttggcggcatgccaactcgcggcccgctctgtgtatgtaggtggc
aatacttcgtccaccacgggcctgaccgtcacattgaccaaagaagaggggggtgagtcg
ggtatcgaagcgggtgctctagtgttggctgaccaaggcgtctgctgcatcgacgagttc
gacaaaatggcgaaaaaccaccaggatggtctgctggaagcgatggagcaacagcaagtt
tctatcgccaaggctggcgttgtggcctccctaccggcgaggtgtagtcttattgccgcc
gccaatcccaagcacggtagctacaacatgaacaagacggttgcggaaaatctcaacatg
gccaagccaattttgtcaagatttgatctagtatatattttacgtgatcgtgcgaataaa
gagcaagatcggatggtgtcgagcaacattatgaatctttaccgaaacggcagcaataac
aatcccttgatgcatagcgatatcgatctttctcaacgagtcatgaccgctggaaacggg
aaagtccgggattatattgcttacgcgcgcgagtattgcaaaccaaaaatgacagctgaa
gctgcaactgtattaaaggatttcttcatggacttgcgttatcctgctgacggaggacgc
cgtccacgggatactgtccctattaccacgcgtcagctcgaagccttgattcgtttatgt
caggcacgagccaaggcatgtctgcgtgactttgtcctcaaggaagacgccttggatgtg
gttgaactcatgagcaaatcggttgagcaagtgcaccgcgacgaaagcggcgtgcttgat
ccaatacgtggaggtgctggcggcaaaagcaataagaaaatgaaaaaggccttcgtccaa
gagatgcagcgcttaattggagccggagctgaatgtagccttgacgatctccgacggatt
gcagacaaagtaaattgcggtttgagcgaattccagccgctggttgaagacctccgaagc
aacggtatcattttgagaaagtccaatgggaactaccaaattttgtg
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