Phaeodactylum tricornutum: PHATRDRAFT_54066
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Entry
PHATRDRAFT_54066 CDS
T01075
Symbol
SybE
Name
(RefSeq) hypothetical protein
KO
K08517
vesicle transport protein SEC22
Organism
pti
Phaeodactylum tricornutum
Pathway
pti04130
SNARE interactions in vesicular transport
pti04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
pti00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
PHATRDRAFT_54066 (SybE)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
PHATRDRAFT_54066 (SybE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pti04131
]
PHATRDRAFT_54066 (SybE)
Membrane trafficking [BR:
pti04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
Sec22
PHATRDRAFT_54066 (SybE)
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GFIT
Motif
Pfam:
Longin
Synaptobrevin
Motif
Other DBs
NCBI-GeneID:
7196974
NCBI-ProteinID:
XP_002177527
JGI:
54066
UniProt:
B7FR63
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Position
1:complement(2477625..2478614)
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AA seq
227 aa
AA seq
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MPPILTQVARSSDALPLIATSTPTHNLSVSQKQQQDAKQLMRSMTAGNPNKMSIQSERMV
FYYMQRDNLCFLTLTEDSYPKRLAFLYLEEVADAVLQELVREFGTDWRANVDQAARPFQF
IHYDPIIQRKQREFRDQRDVKNKSKLQEDLGEIQSIMKKNIDEILNRGEKLDNVSNISNE
LRSKSKDFKWGTKKLTWQARMQQYGPMVVGASIICIVLYVKIFHIGF
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atgcctccaattttgactcaagtggcacggagctccgatgcgttgccgttgatagcgaca
tcaaccccaacgcacaacctctctgtctcacaaaagcagcaacaagatgcaaagcagctt
atgcgcagtatgacagctgggaacccgaataagatgagtattcagtctgaacggatggtc
ttttactacatgcaacgcgataatctatgttttttaaccttgacggaagatagttatccc
aaaagactggcatttctttatttggaagaagtagccgacgctgtactgcaagagctcgtc
cgagagtttggtaccgattggcgggcaaatgttgaccaggcggcgcgtccatttcagttt
attcattatgatcccataattcaacgaaaacagcgagagtttcgtgaccaacgggatgta
aagaacaaatccaaattgcaggaagacttgggcgagatccagtccataatgaaaaagaac
attgacgaaattctgaatcggggtgagaagcttgataacgtctcaaatatatccaacgag
ttgcgcagcaaatcaaaagacttcaagtggggtactaagaaactcacctggcaagcacgg
atgcaacagtacggtcccatggtagtcggtgcttctatcatttgcattgtgctttacgtc
aagatctttcacattggtttctga
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