Phaeodactylum tricornutum: PHATRDRAFT_54246
Help
Entry
PHATRDRAFT_54246 CDS
T01075
Symbol
BiP
Name
(RefSeq) ER luminal binding protein precursor
KO
K09490
endoplasmic reticulum chaperone BiP [EC:
3.6.4.10
]
Organism
pti
Phaeodactylum tricornutum
Pathway
pti03060
Protein export
pti04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pti00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
PHATRDRAFT_54246 (BiP)
04141 Protein processing in endoplasmic reticulum
PHATRDRAFT_54246 (BiP)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
pti03110
]
PHATRDRAFT_54246 (BiP)
04131 Membrane trafficking [BR:
pti04131
]
PHATRDRAFT_54246 (BiP)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pti04147
]
PHATRDRAFT_54246 (BiP)
Enzymes [BR:
pti01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.4 Acting on acid anhydrides to facilitate cellular and subcellular movement
3.6.4.10 non-chaperonin molecular chaperone ATPase
PHATRDRAFT_54246 (BiP)
Chaperones and folding catalysts [BR:
pti03110
]
Heat shock proteins
HSP70 / DNAK
PHATRDRAFT_54246 (BiP)
Membrane trafficking [BR:
pti04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
ER-Golgi intermediate compartment (ERGIC) proteins
PHATRDRAFT_54246 (BiP)
Autophagy
ER-phagy
ER stress-related proteins
PHATRDRAFT_54246 (BiP)
Exosome [BR:
pti04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
PHATRDRAFT_54246 (BiP)
Exosomal proteins of other body fluids (saliva and urine)
PHATRDRAFT_54246 (BiP)
Exosomal proteins of colorectal cancer cells
PHATRDRAFT_54246 (BiP)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HSP70
MreB_Mbl
FGGY_C
Hydantoinase_A
Radial_spoke_3
Motif
Other DBs
NCBI-GeneID:
7197722
NCBI-ProteinID:
XP_002178567
JGI:
54246
UniProt:
B7FUB7
LinkDB
All DBs
Position
4:complement(739667..742082)
Genome browser
AA seq
659 aa
AA seq
DB search
MIFMRIAVAALALLAAPSIRAEEAGEEAKMGTVIGIDLGTTYSCVGVFKNGRVEIIANDQ
GNRITPSYVAFMPSGERLVGDAAKNQATINPENTVFDVKRLIGRKYSDKSVQADKKLVPY
EIISDKDKPMIEVIQNEKTFKFAPEEVSAMVLQKMKLTAETFLGKEIKHAVVTVPAYFND
AQRQATKDAGTIAGLKVERIINEPTAAAIAYGMDKTGGESNVLVFDLGGGTFDVTLLTID
NGVFEVLATNGDTHLGGEDFDQRVMQYFIKMMKKKSDVDISKDKRALQKLRKEVERVKRA
LSSQQQARLEIEDLAEGFDLSETLTRARFEELNNDLFKKTMGPVARVMEDADLSKSEIDE
IVLVGGSTRIPKVQQLISEYFGGKEPSKGINPDEAVAYGAAVQGGILSGEGGDATSEILL
LDVTPLSQGIETVGGVMTKLINRGTTIPTKKSQTFSTHQDNQNVVLIQVYEGERSMTKDN
HNLGKFELTGIPPAPRGVPQIEVTFEVDANGILQVSAEDKGTGKAEKITITAEKGRLSEE
EIERMVREAEEFAEEDKKVKERIDARNGLESYLYNLKNTLDDDEKGLADNLSAEDKKELQ
DMIDETLDWMDGNPEADKEDYDEKLKEVEQVANPIMRNVYSGGAGGGAEDDADFADDEL
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atgatattcatgagaattgccgtagcagcactggccttgctggctgctccctccattcgt
gccgaagaggccggtgaagaggccaagatgggtaccgtgatcggtatcgatctcggcacc
acgtattcgtgtgtcggcgtgttcaagaacggacgcgtggaaatcattgccaacgaccag
ggaaaccgtatcactccttcatacgttgcttttatgcccagtggagaacgtcttgtgggt
gacgctgccaagaatcaggccaccatcaaccccgaaaacaccgtttttgacgtcaagcgt
ctcatcggacgcaaatactcggacaagtccgtgcaggccgacaagaagctcgtcccctac
gaaattatctcggataaggacaagcccatgatcgaagtcatccagaacgagaaaaccttc
aagttcgctcctgaagaagtctccgccatggtgttgcaaaaaatgaagcttacggccgag
acattcttgggcaaggaaatcaagcacgccgtcgttaccgttccggcgtacttcaatgat
gcccagcgccaggcgaccaaggatgccggaacaattgctggtctcaaggtcgaacgcatc
atcaacgaaccgactgcagctgccattgcatacggtatggacaagaccggcggggaatcc
aacgttctcgtctttgatctcggtggtggaactttcgatgtcactcttttgaccatcgac
aacggcgtcttcgaggtgctggccacgaatggtgacacccacttgggtggagaagatttt
gatcagcgcgttatgcagtacttcatcaaaatgatgaagaaaaagtccgacgtggacatt
tccaaagacaagcgtgcgttgcagaagctccgtaaggaagtcgaacgcgtcaagcgagct
ctttcttcgcagcagcaggcccgacttgaaattgaagatttggcggaaggttttgacctc
agcgagactttgacccgtgcccgttttgaggagctaaacaacgatttgttcaaaaagacc
atgggaccggttgctcgtgtcatggaggatgccgatctctccaagagcgaaatcgacgaa
attgtgttggtgggaggttccacccgtatccccaaggttcagcaactcattagtgaatac
tttggtggtaaggaacccagtaagggtatcaaccccgatgaggctgtcgcctacggtgct
gccgtgcagggcggtattctttccggcgaaggcggtgacgcgaccagtgaaattcttctg
ttggacgtcaccccgctttctcagggtatcgaaactgtcggaggtgtcatgactaagctc
atcaaccgtggtaccaccattcccactaagaaatctcaaaccttctccactcaccaggat
aatcagaacgttgttttgattcaggtttacgagggtgagcgttctatgaccaaggacaac
cacaatctcggaaagtttgagttgactggaatcccgccggctcctcggggagtccctcag
attgaagtcacctttgaagttgacgccaacggaattcttcaggtgtctgctgaagataag
ggaaccgggaaggccgaaaagatcacgattactgccgaaaagggtcgccttagtgaagaa
gagatcgagcgcatggtccgggaagcggaagaattcgccgaagaggacaagaaggtcaag
gaacgcatcgatgcccgcaatggactcgaatcttacttgtacaacctcaagaataccttg
gacgatgatgaaaagggccttgccgacaatctttccgccgaagacaaaaaagaactgcaa
gatatgattgacgagaccttggactggatggacggaaatcccgaagccgacaaagaggac
tacgacgaaaagctaaaggaagttgaacaagtggccaatcccatcatgcgaaatgtctac
tccggtggtgccggcggtggcgccgaggatgacgccgactttgctgacgatgagttgtaa
DBGET
integrated database retrieval system
