Phaeodactylum tricornutum: PHATRDRAFT_54420
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Entry
PHATRDRAFT_54420 CDS
T01075
Symbol
Sar1a
Name
(RefSeq) hypothetical protein
KO
K07953
GTP-binding protein SAR1 [EC:3.6.5.-]
Organism
pti
Phaeodactylum tricornutum
Pathway
pti04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pti00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
PHATRDRAFT_54420 (Sar1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pti04131
]
PHATRDRAFT_54420 (Sar1a)
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
pti04031
]
PHATRDRAFT_54420 (Sar1a)
Membrane trafficking [BR:
pti04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
PHATRDRAFT_54420 (Sar1a)
GTP-binding proteins [BR:
pti04031
]
Small (monomeric) G-proteins
Arf/Sar Family
Sar
PHATRDRAFT_54420 (Sar1a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arf
G-alpha
SRPRB
Ras
Roc
MMR_HSR1
GTP_EFTU
Gtr1_RagA
Antibiotic_NAT
AAA_22
PduV-EutP
Motif
Other DBs
NCBI-GeneID:
7200589
NCBI-ProteinID:
XP_002179839
JGI:
54420
UniProt:
B7FXX2
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All DBs
Position
7:complement(379742..380665)
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AA seq
192 aa
AA seq
DB search
MFLLDWWYSALASLGLYHKNAKILFLGLDNAGKTTLLHMLKENRVQVHVPTLHPNTDELI
IGNIKFKTFDLGGHETARRLWQDYFTTVDGVVYLVDAIDRGRFPEAKKELDALLTSEELQ
DVPFLVLGNKIDMPTAASEEELKYALGLMDTYGKDKGPDSSSSVRPIELYMCSVIRRMGY
SDGFKWLSQFLT
NT seq
579 nt
NT seq
+upstream
nt +downstream
nt
atgtttctcctagactggtggtatagtgcgcttgcgagcttgggtctgtaccacaagaat
gcaaagatcctgtttctcggtttggacaatgccggaaagacaacattgctacacatgctg
aaagagaaccgtgtgcaagtccacgtccctacgttgcatccgaacacggacgaactcatc
atcggcaacatcaagttcaagacttttgatcttggtggacacgagacggctcgtcggttg
tggcaggactattttacaaccgtcgacggcgtcgtgtaccttgtggatgccatcgaccga
ggccgcttccccgaagccaaaaaggaactcgatgccttgctgaccagcgaagagctacag
gatgttccgtttttggtactcggaaataaaattgacatgcccacagcggcttcggaagaa
gaacttaagtatgcactgggtttgatggatacctacggtaaagacaaaggtccggacagc
agctcatcagtacgaccgattgagctgtacatgtgttcggtcattcgaagaatgggatat
tccgatggattcaaatggctttcccagtttttgacttag
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