Phaeodactylum tricornutum: PHATRDRAFT_54460
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Entry
PHATRDRAFT_54460 CDS
T01075
Symbol
UBA1
Name
(RefSeq) ubiquitin-activating enzyme E1, protein 1
KO
K03178
ubiquitin-activating enzyme E1 [EC:
6.2.1.45
]
Organism
pti
Phaeodactylum tricornutum
Pathway
pti04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pti00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
PHATRDRAFT_54460 (UBA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pti04121
]
PHATRDRAFT_54460 (UBA1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pti04147
]
PHATRDRAFT_54460 (UBA1)
Enzymes [BR:
pti01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.45 E1 ubiquitin-activating enzyme
PHATRDRAFT_54460 (UBA1)
Ubiquitin system [BR:
pti04121
]
Ubiquitin-activating enzymes (E1)
Ubiquitin activating enzyme
PHATRDRAFT_54460 (UBA1)
Exosome [BR:
pti04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
PHATRDRAFT_54460 (UBA1)
Exosomal proteins of other body fluids (saliva and urine)
PHATRDRAFT_54460 (UBA1)
Exosomal proteins of colorectal cancer cells
PHATRDRAFT_54460 (UBA1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ThiF
UBA_E1_SCCH
E1_UFD
BilD_C
Shikimate_DH
Pyr_redox
DUF5375
2-Hacid_dh_C
Motif
Other DBs
NCBI-GeneID:
7200448
NCBI-ProteinID:
XP_002179732
JGI:
54460
UniProt:
B7FYG1
LinkDB
All DBs
Position
7:<858830..>862239
Genome browser
AA seq
1108 aa
AA seq
DB search
MNYCWRFCLGLLLEQALLRDSFGVRFVPIFHPSPRRVKVHIRNALSSRGGGGGDAVGETE
DDEERYSRQVFALGAEAHKRIRSSTVYLDGPGLDAAYFKGELDDLGRAYHRAARSETGKS
DDDCDVSDEEVLMEYLKRLNPSVQVSVVKYSDFRPLDDSLRGVLLCVDRCHEKLLVMNGL
ARRHNLAFVGTETAGVYGRVFCDFGTSFEVNDTDGETPLVIPLDRVERGISDEILFVTCL
EGQQHDVSKGEEIRFIDPNGDSSEQKCTVIEVHTPLRLSIEVDKKGGSCQEWIESVNKKY
VAFSRIKASKKLSFDDLAIASKKASSDASIFTPSDLGKSFDDNRRAALFACFRAASSFVG
DHLRWADDNDLDDFCELVRTFMSNCESEHCFLSESQHFNVEQFLEVGRAKFSPIQAFFGA
IASQEALKALTGLYHPIQQFLLYDCDEILNSPSDRTCSVNEKEGSDRNTCGLRHILGDSI
VEDLQSMRVFVVGAGAIGCEILKNLAAMGIGSKSKGRVIITDMDTIEKSNLSRQLLFRDS
DVGKFKSSAATQAILRFNNKMKIDSHSSKVGDSEHNPFDDLFWRKGVDIVLNALDNMEAR
FFTDRQCVANGKPLIDSGTLGPKGNVQVVIPHKSESYSSSADPPDPAIAVCTLKNFPYAI
SHTIQWGRDLFEDVFSRRPSQVNDARDSLSSTCVEAFVSRLIQERGENGFQQFAAELKED
VSPDLESSDIRAHSLEWAASTAVKLFRDSIETLLLKHPPGSLDDDGEPFWSGTRRQPRVL
SFSGSVPLDAMQSSVNENLIDFVRYAARLRAEMYASKPIRDPFEFSRNDAEASLNSAEQA
QPSDKEVMDTDTVNVLIDSLRRLSSFSKPLNTAEFEKDDDSNGHIAFVTAASNLRAMSYG
IPPVNRLQTRRIAGNIVPAVISTTAAVSALSCIELVKLAQGAQLKLHRNAFMNLALPFFA
FTSPLPAEVMPGLQGRQYTIWDRLKVRESKKALAKGGISLRKLIRRIKQLASTNPKKVSV
LSISFGPYLLYASFLHDDDKNHLKSSLWNILEELTEVDDDFVSTRSNDNRSTEYSPTQKF
VDLSVIVEDPDNGSECELPLVRVFRRFL
NT seq
3324 nt
NT seq
+upstream
nt +downstream
nt
atgaattactgctggcgattttgtctgggcttgttattagagcaggcgcttttaagagac
tctttcggtgttcgctttgtccccattttccatccttctcctcggagggtcaaggttcat
atcagaaatgcactatcatctcgaggcggtgggggtggggatgccgtcggtgaaactgag
gatgatgaagagcgatacagccgtcaagttttcgctctcggcgctgaagcacataagcga
atccgatcgtctaccgtatacttggatgggccaggactcgatgcagcttatttcaaagga
gaattagatgatctaggccgggcatatcacagagctgcacggtcggagactgggaagagt
gatgatgactgcgatgtatccgatgaagaagtattgatggagtacttaaagcggctcaac
ccatcagttcaggtatcagttgtaaaatattcagactttcggccattagatgacagtttg
cgaggagttcttctgtgtgtcgaccgttgtcacgagaagctactagtcatgaatggcttg
gcaaggcgacacaaccttgcgtttgtggggactgagacagctggcgtgtacggacgcgtc
ttctgcgattttgggacctctttcgaagtaaatgacactgatggagagactccactggtg
attccgctagatcgagttgagcgagggattagtgacgaaatactttttgtaacatgcctt
gaggggcaacagcacgatgtttccaagggtgaagaaatcaggttcatcgatcctaacggc
gattcatcagagcagaaatgcacggtcatcgaagtgcacactcctttgcgactatcgatt
gaggttgacaaaaaaggcggatcttgtcaagagtggatcgaaagtgtaaataagaaatat
gtggcattctcccggatcaaggcttctaagaaactttcctttgacgatctcgcaatagcg
agtaaaaaagcgtccagcgatgcttccattttcactcctagcgatttaggaaagagtttt
gatgacaaccgaagagcggcacttttcgcttgtttccgagctgcatcaagttttgttggg
gatcatctaagatgggctgacgacaacgacttggatgatttctgtgagctagtccggacg
tttatgtctaactgcgagtctgagcactgctttctttctgaatcgcagcattttaatgtt
gaacagtttcttgaggttggaagagcgaagttcagccctatccaggctttctttggtgcg
atagcatctcaagaggcattaaaagcgttgaccggtctttaccaccctatccaacaattc
cttctgtacgattgcgacgaaattttgaactctccttcagatcgcacatgttctgtaaac
gaaaaggagggaagtgaccgaaatacatgtggacttcgccatatactgggtgattctatc
gttgaagatctacaatccatgagagtgtttgtagtgggtgctggagcaataggctgcgag
atccttaagaatctggcggcaatgggtataggatccaaaagcaaaggccgagtaattatc
acggacatggatactattgaaaaatccaatttaagccgacagctactttttcgcgacagc
gacgtcggtaaattcaagagtagcgctgccactcaagctatccttcgattcaacaacaaa
atgaaaattgattctcattccagcaaagttggagactccgagcacaatccctttgatgat
ctgttttggcgcaaaggtgttgacattgtgttgaatgcacttgacaacatggaagctcgc
ttttttacagacagacaatgtgttgccaatggcaaacctttgattgactccggaacgctt
ggtccgaagggaaatgtccaagtcgttattccccataaaagcgaatcgtattcgtcgagt
gctgacccgcccgatcctgcgatagcggtgtgtacgcttaagaacttcccttatgccatt
tcccacactattcaatggggacgtgatctatttgaggacgtgttttcgaggagaccatct
caagtcaatgacgcaagggactctttgtcctcaacctgcgtcgaagccttcgtttcaaga
ttgattcaggaacgaggagagaatggatttcaacaatttgctgcggaactgaaggaagat
gtgagtcccgatctcgagtcgtcagatatacgggcgcactcgttagagtgggctgcgtct
actgcagtcaaactttttcgggattctatagagacgcttcttctgaaacatcccccggga
agtttggacgatgatggcgaacccttttggagtggaacacggcgacagccacgtgtttta
tcgttctctggttccgtacctcttgatgcgatgcagtcaagtgttaacgagaatctcatc
gactttgtgaggtatgccgctcggttgcgggcagagatgtacgctagcaagcctattcgt
gacccttttgaattctcacgaaatgatgctgaggcaagtttaaacagtgcagagcaggct
caaccatctgacaaagaagtgatggacacagacacagtcaatgttcttattgattctctc
aggcgactatcatctttttcaaaacccctaaataccgccgagtttgagaaagatgacgat
tccaatggacacattgcgtttgttactgctgctagcaatcttcgagccatgagctatgga
attccgcctgtaaatagattgcaaacaaggcgaatagcggggaacattgttcctgctgta
atctcgacaactgcagccgtctcagctctttcatgcattgaactcgtcaagcttgcgcag
ggagcgcaattgaaattacacaggaatgccttcatgaatctggcactaccgtttttcgct
ttcacttccccacttcctgcggaggtaatgccgggcctgcaaggtcgtcagtacacaata
tgggatcgtttgaaggtgcgggaaagcaagaaggccctggcaaagggtggaatatcccta
aggaagcttattcgtcgaataaaacaactagcttctacgaaccccaaaaaagtgtcagtt
ttgtccatatcttttggtccctacctcctgtatgcaagcttcctccacgatgatgacaaa
aatcatctcaagtcctccttgtggaacattcttgaagaattgaccgaagtcgacgacgac
tttgtatctactcgaagcaacgacaacaggtcaactgaatattcgccgacacagaaattt
gtggatttatcggtcatcgttgaagatcccgacaatggcagtgaatgcgagttgccattg
gtgagggtgtttcggagatttcta
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integrated database retrieval system
