Phaeodactylum tricornutum: PHATRDRAFT_54533
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Entry
PHATRDRAFT_54533 CDS
T01075
Symbol
RAD51-g1
Name
(RefSeq) Rad51 DNA recombination/repair protein
KO
K04482
DNA repair protein RAD51
Organism
pti
Phaeodactylum tricornutum
Pathway
pti03440
Homologous recombination
pti03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pti00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PHATRDRAFT_54533 (RAD51-g1)
03460 Fanconi anemia pathway
PHATRDRAFT_54533 (RAD51-g1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pti04131
]
PHATRDRAFT_54533 (RAD51-g1)
04121 Ubiquitin system [BR:
pti04121
]
PHATRDRAFT_54533 (RAD51-g1)
03400 DNA repair and recombination proteins [BR:
pti03400
]
PHATRDRAFT_54533 (RAD51-g1)
Membrane trafficking [BR:
pti04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
PHATRDRAFT_54533 (RAD51-g1)
Ubiquitin system [BR:
pti04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
PHATRDRAFT_54533 (RAD51-g1)
DNA repair and recombination proteins [BR:
pti03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
PHATRDRAFT_54533 (RAD51-g1)
RecA family proteins
PHATRDRAFT_54533 (RAD51-g1)
FA (Fanconi anemia) pathway
Other FA pathway factors
PHATRDRAFT_54533 (RAD51-g1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rad51
RecA
AAA_25
HHH_5
ATPase
AAA_22
DnaB_C
AAA_24
ABC_tran
AAA_28
Motif
Other DBs
NCBI-GeneID:
7201156
NCBI-ProteinID:
XP_002180445
JGI:
54533
UniProt:
B7G0B3
LinkDB
All DBs
Position
9:492706..494376
Genome browser
AA seq
350 aa
AA seq
DB search
MAAAVEQQQYENPVAQEFQQEGGAEEEVEVAVSYQTLDVLQEHGIAANDIQKLNAAGYHT
VESIAHATIRKLSDVKGISEAKVLKLKEITKSMVPMDFKTAADALEDRKALVTLTTGSIE
LDKLLEGGVETGSITEVFGEFRTGKTQLCHTLCVTCQMAVTEGGAEGKAIYIDTEGTFRP
NRLQAIAERFGLDPTVALENVAYARAHNSEHQAELLKLAAAIMSQDRYALLVVDSATALF
RTDYTGRGELSERQMQMAQFLRQLTRLAEEFGVAVFITNQVVANPDGMSFAKDSTKPIGG
NIMAHASTTRLRLRKGRGDNRICTVFDSPTLPEADAQFAVGAQGVCDAQD
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atggctgccgcagtagaacaacagcagtacgaaaacccggttgcccaggagttccaacag
gaaggaggagccgaagaggaagtcgaggttgcggtatcgtaccaaacattggatgtttta
caggagcacggtatcgctgccaacgacattcaaaagctcaatgcggcgggatatcacacg
gttgaatcgattgcccacgcgacgattcgtaagctttccgatgtcaagggaatttcggaa
gcaaaagtgctcaagctcaaagagattaccaaatctatggtacccatggatttcaaaacg
gctgccgatgcgctggaagaccgcaaggctcttgtcacgctcaccacagggtccatcgaa
ctcgacaagcttttggaaggtggtgttgaaaccgggtccatcacggaagtatttggggaa
tttcgtaccggcaagacccaactttgccacacgctgtgtgttacctgtcaaatggcagtc
accgaaggcggcgccgaaggaaaggcgatctacatcgacacggaaggaaccttccgtccc
aatcgcctccaagctattgccgaacgcttcggtttggaccctaccgtcgccctcgaaaac
gtggcctacgcccgagcacacaattctgagcaccaggctgagctgctcaaattagccgca
gcgatcatgtcgcaggatcgctacgcccttctcgtggttgacagcgcgacggctctcttt
cgtacagactacaccggccgcggtgaactttctgagcggcaaatgcaaatggcacaattt
ttgcgtcaattgacccgattggccgaagaattcggtgtcgctgtttttatcaccaaccaa
gtggtggccaaccctgacggcatgagttttgccaaggacagcaccaagcccatcggcgga
aatattatggcacacgcatcgaccacgcggcttcggctacgcaaaggacgtggtgacaat
cgtatttgtaccgtctttgatagccctacgttgcccgaagctgacgcccaattcgccgtc
ggcgcccaaggtgtctgtgacgcacaggactag
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