Phaeodactylum tricornutum: PHATRDRAFT_54534
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Entry
PHATRDRAFT_54534 CDS
T01075
Name
(RefSeq) hypothetical protein
KO
K07374
tubulin alpha
Organism
pti
Phaeodactylum tricornutum
Pathway
pti04145
Phagosome
pti04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
pti00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
PHATRDRAFT_54534
09142 Cell motility
04814 Motor proteins
PHATRDRAFT_54534
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pti03019
]
PHATRDRAFT_54534
03036 Chromosome and associated proteins [BR:
pti03036
]
PHATRDRAFT_54534
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pti04812
]
PHATRDRAFT_54534
04147 Exosome [BR:
pti04147
]
PHATRDRAFT_54534
Messenger RNA biogenesis [BR:
pti03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
PHATRDRAFT_54534
Chromosome and associated proteins [BR:
pti03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
PHATRDRAFT_54534
Cytoskeleton proteins [BR:
pti04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
PHATRDRAFT_54534
Exosome [BR:
pti04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
PHATRDRAFT_54534
Exosomal proteins of other body fluids (saliva and urine)
PHATRDRAFT_54534
Exosomal proteins of colorectal cancer cells
PHATRDRAFT_54534
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
DUF7281
Motif
Other DBs
NCBI-GeneID:
7201162
NCBI-ProteinID:
XP_002180656
JGI:
54534
UniProt:
B7G0C3
LinkDB
All DBs
Position
9:complement(509244..511095)
Genome browser
AA seq
451 aa
AA seq
DB search
MRECISIHLGQAGIQTGNQCWELYCLEHGIEPDGTMPGDKSLGKADDSFNTFFSETSSGS
HVPRAVYVDLEPSVCDEVRNGTYKQLYHPEQIINGKEDAANNYARGHYTTGKEIVDLVLD
RIRKLADNCTGLQGFLVFHATGGGTGSGLGSLLLERLSVDYGRKSKLSFAVSPSPQVSTA
VVEPYNSVLSTHALLEHTDCTFCLDNEALYEVCRRNLGIERPTYTNLNRLIAQVISSLTA
SLRFDGALNVDVTEFQTNLVPYPRIHFMLTSYAPVISTEKAFHENLTVAEITNSVFEPSN
MMTKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQAP
MQVPGGDLAQVKRAVCMVANTTAIAEALSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDLAALEKDYEEVGAETGDGADAGLDEEY
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgaatgcatttcgattcatttgggccaggccggtattcagactggaaatcagtgc
tgggagctttactgcttggagcatggtatcgaacccgatggtacgatgcctggcgacaag
tctttaggaaaagctgacgactccttcaacactttcttcagcgagacatcctctggtagt
catgtcccccgcgctgtttacgtcgatctcgagccatctgtctgtgacgaagtgcgcaat
ggtacctacaagcagctttaccaccccgaacagattattaacggaaaagaggatgccgcc
aacaactacgctcgtggacactacaccactggcaaggaaattgtcgacttggtattggat
cgtatccgcaagttggcggacaactgcaccggccttcaaggattcctcgtctttcacgcg
actggtggaggtaccggatccggtctaggaagtcttctattggagcgcttgagtgtggac
tacggacgcaagtctaagctctcgttcgccgtctctccatcaccccaagtctcgacggcg
gtggtggaaccttacaactcagtcctctccacccatgccctccttgagcacacggactgc
actttctgtctcgacaacgaagctctctacgaggtctgccgtcgcaatctcggaatcgag
cgccctacctacaccaacttgaaccgtctcattgctcaggtcatctcgtcgctcaccgcc
tcgcttcgttttgatggagcacttaacgtcgatgttacggaattccagacaaacttggta
ccttacccccgtatccatttcatgttgacttcttacgcgcctgtcatctcaaccgaaaaa
gctttccatgagaaccttacggtcgccgaaatcaccaacagcgttttcgagccgagcaac
atgatgaccaagtgtgatcctcgtcacggaaaatatatggcctgttgcctgatgtaccgt
ggcgacgtcgtgcctaaggacgttaacgctgccgtcgctaccattaagacaaagcgcacg
attcaattcgttgattggtgccccactggtttcaagtgtggcatcaattatcaggcgccc
atgcaggttccgggcggagatcttgcccaggttaagcgtgccgtgtgcatggttgcaaac
accacggccatcgccgaagctctttctcgtatcgaccacaagtttgatctcatgtatgcc
aaacgtgcgttcgttcattggtacgtcggcgaaggaatggaagaaggagaattttccgag
gcccgtgaagatttggcggcgcttgagaaagactacgaagaggttggtgcggagactggc
gatggcgcggacgctggattggatgaagagtattag
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