Phaeodactylum tricornutum: PHATRDRAFT_54688
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Entry
PHATRDRAFT_54688 CDS
T01075
Symbol
myoA3
Name
(RefSeq) hypothetical protein
KO
K10357
myosin V
Organism
pti
Phaeodactylum tricornutum
Pathway
pti04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
pti00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
PHATRDRAFT_54688 (myoA3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pti03019
]
PHATRDRAFT_54688 (myoA3)
04131 Membrane trafficking [BR:
pti04131
]
PHATRDRAFT_54688 (myoA3)
03029 Mitochondrial biogenesis [BR:
pti03029
]
PHATRDRAFT_54688 (myoA3)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pti04812
]
PHATRDRAFT_54688 (myoA3)
Messenger RNA biogenesis [BR:
pti03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
PHATRDRAFT_54688 (myoA3)
mRNA cycle factors
P-body specific factors
PHATRDRAFT_54688 (myoA3)
Membrane trafficking [BR:
pti04131
]
Others
Actin-binding proteins
Myosins
PHATRDRAFT_54688 (myoA3)
Mitochondrial biogenesis [BR:
pti03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
PHATRDRAFT_54688 (myoA3)
Cytoskeleton proteins [BR:
pti04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
PHATRDRAFT_54688 (myoA3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
AAA_16
ABC_tran
AAA_22
AAA_10
nSTAND3
Sigma54_activat
NPHP3_N
TsaE
Zeta_toxin
AAA_lid_6
AAA_19
Motif
Other DBs
NCBI-GeneID:
7202004
NCBI-ProteinID:
XP_002181360
JGI:
54688
UniProt:
B7G2D7
LinkDB
All DBs
Position
12:complement(353352..356620)
Genome browser
AA seq
1027 aa
AA seq
DB search
MASSHDSHVWVRTDLVESVLGNDGTLPKGWRPRKRTRVSGDEWGWVRAVVHQTTNSTNTV
DEATATSASEATSPFAHVKLRKTNALSPAQKSPSSRWTGSPTRLAKTVQITLTVDDPLLA
NGKLNGETVTFSYNTGEQSKVCVANAWWREGQPPPEDLTSLEQLHEPAVVFCLLQRYQLD
HVYTYTGKILLALNPFQTLPIYGEEIMRLYWHTTGSSSPKAQYERPPPHIYAIAEDAYRS
MMRSLQINASRGENQSILVSGESGAGKTVTTKIIMRYLATLSEQRSHTSRVGIESQVLQS
NPILESFGNARTVRNDNSSRFGKFIEISFRDGSLVSASVETYLLEKVRLISQSPGERNYH
IFYEALVGLSSKDAQSLGIADSSPRDFRMTAVSGTFDRRDQVRDVDTYRDLRQALDTVGF
STEEQHGLFVVVCALLHASNLTLTEYGHDASALDESNPSLPATIALLGVDPEDLNNAVCS
CAIEAGGEILFKNLPVEKAHKAMEALIKATYGALFTFIVRKINSKIQAQHDTSGLWQASI
GVLDIFGFESFEVNSFEQLCINYCNEALQQQFNRFVFKLEQQEYHKEGIDWSFIAFPDNQ
DVLDLIEKRHDGILSVLDEQSRLGRCTDKSFAQAIYEKCGAHPRFESSKSQQAILAFGIQ
HYAGSVEYNTANFLEKNRDDLPKETTELLMSSSNPFLVGLGKILCEKSLQRAASSILRDS
VGSQFSSQLQLLRKRIESTAPHYVRCLKPNDDLVPNSFDPLVIADQLRCAGVLEAIRVSR
VGFPHRYFHDHFVQRYSLLVAKRLTKRGRGLNGCDSCGSLVEEISLLGMQMGKTKVFLRR
RAFEALEHLRGLKMEKAASKIQAFGRMIVAKLNYDISVYAAVLIQNFFRQIGAFRLERAQ
RIEDAAERIQCSWRSYDARRTMQAARYVAWWCQSTYRGSVARQLCAYLFLDRKVLTIQHA
WKYYASTRTFRKLRKAVVLLQCRHRGRVAYRDLCRLRREARDLSTVAAERDQLRQESQRL
RRALEHA
NT seq
3081 nt
NT seq
+upstream
nt +downstream
nt
atggcgagctcgcacgattcacacgtatgggtccgaaccgacctggtcgaaagcgtcttg
ggtaacgacgggactttacccaagggttggcgtcctcggaaacgcacacgggtaagcggt
gatgagtggggatgggttcgggcggttgtccaccaaacgaccaactcgacgaataccgtt
gatgaggcaacggctacgagtgcctcggaagcaacttcgccgtttgcacacgtaaaatta
cgaaagacgaacgcattatcgccggcacaaaagtcgccctcgtccagatggaccggatct
ccgacacgactcgccaagacggtacagattacgctcacggtagatgatcccctgctggcc
aatggaaaactcaatggtgaaaccgttacgttcagctataatacgggggaacaatccaaa
gtctgcgtcgctaacgcctggtggcgcgaggggcaaccgccaccggaagacttgaccagt
ttggaacaattgcacgagccagcggtagtcttttgcctcctccaacgttaccagttagac
cacgtttacacatacacgggcaagattcttctggcattgaatccattccaaacgttaccc
atttacggggaagagattatgcgattgtactggcacacaaccggctcgtcgtcgccgaaa
gcccaatacgaacgcccaccacctcacatttacgctattgcggaggacgcttacagatcc
atgatgcgctcactccaaatcaatgcctcgcgtggagaaaatcaatccattctagtatcg
ggcgaaagtggtgctggaaaaaccgtcaccacgaaaatcattatgcgctacctggcgact
ctgtcggagcaacgctcccacacttccagggtaggcatcgagtcgcaagtacttcagagt
aatcccattttggaatcattcggcaacgcccgtaccgttcgaaacgataattcgtcacgc
tttggcaaattcattgaaatatccttccgggacgggtctctcgtatcggcatcggttgaa
acgtacctactggaaaaggttcggctgatttcgcagtcgccgggtgaacggaattatcac
attttctacgaagccctggtaggtttatcttcaaaagatgctcaaagcttgggtattgcc
gactcatcaccacgagacttccgcatgacggccgtgtccggtaccttcgatcgccgcgat
caggtacgcgatgttgatacataccgcgatttgcgacaggccttagatacagttggtttt
tcgacagaagagcagcacggcctattcgtggtagtatgcgcattgttgcacgcgtcgaat
ttaactctgaccgagtacggtcacgatgcgagtgcattggatgaatcgaaccctagtttg
cctgcgacaattgctttgctcggagtcgatcccgaggatttaaacaatgccgtctgtagc
tgcgctatcgaagctgggggggaaatcttgttcaagaatttacctgtggagaaggcacat
aaggcaatggaagctttgatcaaggccacctatggtgcgctcttcacgtttattgtgcgc
aagatcaactcaaagatacaagcacaacacgatacaagcggattatggcaagcttcgatt
ggcgttttggatatctttggttttgaaagcttcgaagtgaactccttcgagcagttgtgc
atcaattactgtaacgaggcgttacagcaacaattcaacaggtttgtattcaagttggaa
cagcaagaatatcacaaggagggaattgactggtccttcattgcgtttcctgacaatcag
gatgttcttgatttgattgaaaagcgtcacgatggaatattgtccgtacttgacgaacaa
tcccggctgggccgatgtacggacaagtctttcgctcaagctatttatgagaagtgcggt
gcccaccctcgttttgaatcttccaaatcacagcaagccatactagcatttggaattcag
cactatgctggctccgttgaatacaacacggctaactttttggaaaagaacagggacgac
ttgccgaaagagacaacagaactgcttatgtcgagttccaatccgtttttggttggcctt
ggaaagatactttgtgaaaaatcattgcaacgcgccgccagttccatcttacgggacagc
gtcggcagccagttcagctcacaattacagttgctacggaaacgtatagaatcaacagct
ccgcattacgtccggtgtcttaaacccaatgacgatttggtaccaaatagctttgatcct
ttggtgattgccgatcaattacgctgtgctggtgttctagaggcgattcgagtgtctcga
gtcggatttccgcaccgatattttcacgatcactttgtgcagcgctacagtttactggta
gctaagcggctgaccaagcgagggcgagggctgaacggttgtgactcttgcggaagttta
gtggaagaaatctctcttctgggaatgcaaatgggcaaaacaaaagttttccttcgtcgt
cgtgcatttgaagccttggaacacctacgaggactcaaaatggaaaaggccgcctcaaaa
attcaagcatttggacgaatgatcgtcgcgaaactcaattatgatatatctgtgtacgct
gccgttttaatacaaaacttctttcgacaaatcggtgcattccgtcttgaacgtgcgcag
agaatcgaagatgctgccgagagaattcagtgcagctggagaagttacgatgcacgaagg
acaatgcaagctgcgcgttacgttgcctggtggtgtcagagtacttataggggaagtgtc
gcccgtcagttatgtgcctatttatttttggaccgtaaggtgttgacgatccaacatgct
tggaaatattatgcatcaactcgaacttttcgtaagttacgcaaagcggtggtccttcta
cagtgtcgacaccgtggtcgtgttgcctatcgcgacttgtgcagactgcgccgcgaagct
cgagacctgtctaccgttgctgctgaacgcgatcagcttcgccaggaatctcagcgtctt
cgtcgagcgcttgagcacgcg
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