Phaeodactylum tricornutum: PHATRDRAFT_54789
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Entry
PHATRDRAFT_54789 CDS
T01075
Name
(RefSeq) hypothetical protein
KO
K12397
AP-3 complex subunit beta
Organism
pti
Phaeodactylum tricornutum
Pathway
pti04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
pti00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
PHATRDRAFT_54789
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pti04131
]
PHATRDRAFT_54789
Membrane trafficking [BR:
pti04131
]
Endosome - Lysosome transport
Others
AP-3 complex
PHATRDRAFT_54789
Endosome - Golgi transport
PHATRDRAFT_54789
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
Cnd1
HEAT_2
HEAT
SPG48
Motif
Other DBs
NCBI-GeneID:
7202729
NCBI-ProteinID:
XP_002182117
JGI:
54789
UniProt:
B7G4R0
LinkDB
All DBs
Position
14:complement(697009..701055)
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AA seq
1205 aa
AA seq
DB search
MKWLLASVSKGRDVSDFYPHVVKLVGAYSLEVRKMVYMYLEQYADHDPTTRELSLLSINA
FQRGLADTEQWIRALALRVLTSIRLADILQIQILGVQKCSQDSSPYVRKCAANALSKLHP
RCAPDPSQQTLLLEILQSMLDRDKATMVLTSALIAFQELCPERLELLHGSFRKTCHLLTD
MDEWGQVVTIEILARYCRRFFKEPLGWRNGSAEQIDREQGFYSDEEDASTEEESSNVLFS
TQEDTELAEDHQRLLHAAMPLLKSRNAGVVLATCSLQYYCGISSIQVRAAMGRALVRIHR
DCREIQYVVLTAIRDLVKHCPSAFAPFLHDFFVKALDPPFTRLIKLDILTSLALEPAAIK
AVLQEMRSYVRDGHVEFVRHAIRAVGRTVELARIVYDRHGQKSGKTSVLAKERAETNSIA
LDCLHGLLTLTQTSDHVVIVGECVCVMQRILQLLQAPEPYTGEISVVKDPNNVQQRAVQR
ILILLVYTLSSRVENAPEDDEDASEPTVLAKIAVSLSSDATASALWVVGSLCFAPLTESP
LSESVGVGLVKGSARLEVARLIARAFLEMEAVEKEQAIHFASRIMVSKATSLNGSSTEEF
ALCEAILSMARTDVNVDVRDRARFESNLVRATVGLQHDTDAMEDLPVLKRQLTVGDAKRM
LLTSKPACSSLPLEDDFSTVSGENGGFRFGTLSSLVGHRARKAYLPLPRWADQNSSDTLR
VPIEDKKTDALKDVEGETRTKNTNGANEFYESSDDDEQDSSSESSSQDSSDEAGSSSDSY
SDESSSSDDDDESSSDDSDVGMQSLGQDATLIPMEVEQRKVAHDLNSQKLPLPVVENVDG
SSSSEEEASSTSSDDETSTDSYKLSPKANGGTHDGTFIPLDASSKAAPAATSTIASSLAS
DFEGMTLAPAIQNQKPQLDPDRDRDSSVWQVWVRPEHANGLLVKIRYLRGPTRSKEAQVL
VGTGAEKPSLVLLQVRFENSKDTTVRRLRILQRASASGTSSSIAPRKMLLPPEIDQLKKG
QTVDHIVAIEFASVSDREGTMLAKLEVKFSTGGIPVEIKPSLCDLLLPCFRSVADFDQAV
ARLQGFQRVDTRFPMSDDSQAQRDTLMSRLMRTAPWTLILEGDAEATRDETWPGQKLRLA
GTLPASSDPVYVLVTITGSGITGPGSAGGGCQALLSVCSDNALAVNSILNTLKKTVQNLS
DTETQ
NT seq
3618 nt
NT seq
+upstream
nt +downstream
nt
atgaaatggttactcgcctccgtgagtaaaggacgagatgttagtgacttttatccgcac
gtcgtcaagctggtcggagcttacagtctggaggtacgcaaaatggtctatatgtacctc
gaacagtacgcggatcacgacccaacaacacgcgaactctctctgttgtccatcaacgct
ttccaacgtggtttagccgatacggaacaatggattcgagctctggctttgcgtgtcttg
acctcgattcgactcgccgatattttgcaaattcaaatattgggcgtccaaaaatgctct
caggattcgtcaccctacgtgcgtaagtgtgccgcgaacgccttgtccaagctgcatccg
cggtgtgcaccagatccgtcccagcagaccctcttattggagattttacagtccatgctg
gatcgagacaaggctaccatggtgctaacgtccgccttgattgcgtttcaagaactgtgt
ccggaacggctggaactcttgcacggttcttttcgaaaaacgtgtcatctcttgaccgac
atggacgagtgggggcaagtcgtgactattgagattctggcacgatactgtcgacgtttt
tttaaagaacccctgggatggcggaacgggtctgcggagcagattgatcgcgaacaaggt
ttctattccgacgaagaggatgcaagcaccgaggaagaatcttccaacgttttgttttcg
actcaggaggacaccgagctggccgaagatcatcaacgtctcctacatgccgctatgcct
ttgctcaaaagtcgcaacgctggcgtcgtactcgccacctgctctctgcaatattactgt
ggtatctccagtattcaagtacgtgccgctatgggaagggcacttgtcaggatccataga
gattgccgcgaaattcaatacgtggtattgaccgccattcgcgatttggtgaagcattgc
ccatcagcgtttgccccatttttgcacgattttttcgtcaaggctctagatccgcccttt
actcgtctgatcaagctcgatattctgacttcgctggcgctggagcctgctgccattaaa
gccgtgctgcaagaaatgcgctcctacgtgcgagacggacacgtcgaattcgtgcggcat
gcaattcgagcagttggacgtaccgtcgaattagctcgcatcgtgtatgatcgacacggt
caaaaatctggcaaaaccagcgttctggctaaagaacgtgccgaaacgaatagtatcgca
ttggattgcttgcatggactattgacgttgacgcaaacatcagatcacgttgtcattgtt
ggagaatgtgtttgtgtgatgcagcgcattttgcagctgttgcaagcgcctgagccctac
accggcgaaatttctgtggttaaagatcctaataatgttcagcaacgagccgtgcagcgc
attttgatactgctggtgtataccctatcttcacgcgtcgagaacgcaccagaggatgat
gaggacgcttctgaaccgactgtgttggcaaaaatcgccgtttcgctttcatccgatgca
acagcatccgccttatgggttgtcggaagtttgtgttttgcgcctctaacggaatcaccg
cttagtgaatcggtgggcgttggcctggttaagggttctgctcgtttagaagtggctcgt
ctaatagcacgggcgtttctggaaatggaagcggtcgagaaggagcaagcaattcatttc
gcatctcgtattatggtctctaaggccacctctttgaacggatcgtcaactgaagagttt
gccctgtgtgaggctatcttgtcgatggctcgtaccgacgtcaacgtcgatgttcgagat
cgtgcccgattcgagtccaaccttgttcgagccaccgtcggccttcaacatgacacagac
gcaatggaagacctaccagtactaaaacgacagctgacggtcggagatgcaaaacgaatg
ttgttgacatccaaaccggcatgttcttctcttccactggaagatgatttcagtaccgtt
tcgggcgagaacggtggctttcgttttggaactctcagtagcttggttggccatcgtgcc
cgtaaagcatacttgccattgccccgctgggcggatcaaaacagttctgatacgttacgt
gtgccaattgaagacaaaaagacagatgctttaaaagatgttgaaggtgagacgagaacg
aagaacacgaacggtgcaaatgagttttacgagtcctcagacgatgacgagcaggacagc
tcttcggaaagctcctcgcaggacagtagcgatgaagccggatcttcctcggactcatac
agcgatgaatcatcttcttctgacgatgacgacgagtcttctagcgatgatagtgatgta
ggcatgcaaagccttggtcaagatgccacgttgataccgatggaagttgaacagcggaaa
gtcgcgcacgatttgaattctcagaaactacctcttccagtggtagagaatgttgacggg
tcttcctcttccgaagaggaggccagcagcacgtctagcgatgatgagacctcgaccgat
agttacaaactcagtccaaaagccaacggtgggacacatgacggcactttcataccccta
gacgcttccagcaaagctgcgcctgctgcaacttccaccattgcctcctccttagctagt
gactttgaaggcatgacattggcacccgctatccaaaatcaaaagccgcaactggatccc
gaccgcgacagggattctagcgtttggcaagtctgggtacggcccgaacacgcgaatgga
ttgttggtgaagattcgctatctacgaggaccaactcggtccaaagaggcgcaggttttg
gtcggcacgggagccgagaaaccttccctggtcctgttgcaagtgagatttgaaaacagt
aaggatacaacagttcggcgattgcgcattctccaacgggcttccgcttcgggtacgtct
tcatccattgcaccccgcaaaatgcttcttcctcccgaaatcgaccaactgaaaaaagga
caaaccgtggatcacatcgtggccattgaattcgccagtgtttccgatcgggaaggtaca
atgttggcaaaactggaagtcaagtttagcactggcggcataccggtggaaataaagccg
agtctttgcgatttattgttgccctgttttcgatcggtggcagactttgatcaagccgta
gcccgactgcaaggctttcaacgggtggatacacgctttcctatgtccgacgattcccaa
gcccagcgtgacaccctgatgtcccgtttgatgcgaacggcgccctggacattgatcctc
gaaggtgatgccgaagctaccagagatgaaacatggcccggccaaaagttgcgtttggcg
ggcacgctgccagcatcgtccgatcccgtgtacgtcttggtgacaatcacggggtctggt
attacgggcccgggtagtgccggtggtggatgccaggcactcttgtctgtttgttccgac
aacgcattggccgtgaatagcattttgaacacgttgaaaaagacggttcagaacttgagc
gatacggaaacacagtag
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