Phaeodactylum tricornutum: PHATRDRAFT_54801
Help
Entry
PHATRDRAFT_54801 CDS
T01075
Symbol
CHC
Name
(RefSeq) hypothetical protein
KO
K04646
clathrin heavy chain
Organism
pti
Phaeodactylum tricornutum
Pathway
pti04142
Lysosome
pti04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pti00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
PHATRDRAFT_54801 (CHC)
04142 Lysosome
PHATRDRAFT_54801 (CHC)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
PHATRDRAFT_54801 (CHC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pti04131
]
PHATRDRAFT_54801 (CHC)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pti04147
]
PHATRDRAFT_54801 (CHC)
Membrane trafficking [BR:
pti04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
PHATRDRAFT_54801 (CHC)
Exosome [BR:
pti04147
]
Exosomal proteins
Proteins found in most exosomes
PHATRDRAFT_54801 (CHC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_H_link
Clathrin-link
TPR_COPA_B
Motif
Other DBs
NCBI-GeneID:
7203043
NCBI-ProteinID:
XP_002182318
JGI:
54801
UniProt:
B7G4Y3
LinkDB
All DBs
Position
15:complement(76515..82484)
Genome browser
AA seq
1702 aa
AA seq
DB search
MAATPITFTEALNLQQLGVPEAAIKHGKTTMESDRFIVAVEEAQVTMIDLRNNAAVERKA
MKAEAAIMNPGEQRILALRSGVNVQIFNLDTRQKLKSHQLTEPCVYWKWTSNSNLAMVTA
SAVYHWSLEGDSAPQQVFDRHPSLQNAQIINYRVSQDGKWCVLGGIAPGANGVVNGSMQL
YNFEKKLSQPLQGHAAAFAVLKIPGRDDPAQVIVFHEKKHDSPEPPKLYVREVGRTAGPP
YGVQPVQIPVPQDGANDFPVSLAIVEKDSLAYMMTRMGYVYVFDAMSAKTVFRNRVTQET
VFLSVAQESTGAVFGITVRRGQVFRLQVNNQALIPYVLNTLNDEDLALKLAGRLNLPGAE
NLQARAFERLLQQGNVAEAARIVAGSGSALRTPATIARFQQIPAQPNQVPPLLQYFSILL
ETGTLNEQESIEVAKPVLQQQRIPLMEKWLKENKLTSSESLGDLIMPHDTGMALSVYLRA
ECHGKAIQCFVQRGEYDKIVSYASSVGFQMDYTQMLNQLLFSNPAGALDLAKGLATAEAF
LSSNRLQETTAFLLEALKENKPEHAFLQTKLLEINLLSGAPQVADAIMQQGMLTHYDRPH
VGKLCERAQMWQRAAEHYTEIADIKRVFKNSHQMSPEFVVEYFGKLNREQSIMLLKDMMG
RGPQNMQVCVEVAKKYHEELGSEQLVQVFESNRATEGLYYYLGAIVNSSEDPFVHFKYIQ
ASCMLGQFKEAERVCRDSTVYIAEEVKEYLKGAKLPDPRPLIHVCDRHGFVDELTEYLYL
NSLLQYIEVYVTKVSPTKTPMVVGKLFDLGANEDFIKRLLMAVGTACPVDELVEIAETRN
RLRLLQPWLEARVATGSTEPGTHDALGKIYITLNRDPKAYLLNNMFYNPKVLGPYCEALD
PQLAFIAYKRGAGECDDELIKVSHDHGLYRDLAQYLVERQDLVLWGKVLNKEEGKEDEED
PQRRQLIDQVVEWALPESTNADEVSCTVKAFMAADLPSELINLLERIVLQGSDFSDNKNL
QNLLILTAIRADASRVAGYVDQLDNFDAKDIALICVSESHMLYEEGFSIYTKFSKPEFTQ
DKDEQVEMQVLAIGVVVDNMKDLDRAKTYATQCDEKPVWSKLGKAQLEGKFAADAIESFI
NADDPSEYVMVCAEANEAEIWMELIPYLKMARKTMQENLVDTELIYSYAKTNNLTELEQF
VTGPNVSNIQSIGDRCFNEGLYQAAKILFISINNNSKLALCHIHLEEYREAVEAAKKANN
VSTWKAVCFACLRADEFRLAATCGLEVIKYPDHLDEVVTHYSDLGHFDHLISLFEQGIGL
EDAHIGIFTELGILYTKHIPEKVMDHCKVFFTKLNVSKVVRACERARMYKPAVYLYMQDK
QHDNAIKTMIERAPAWENDLFLDAVTKIRNAELTYKAIAYYLSMHPNLFTRLMEVMEDTA
DHSRVVSQLRRTGDWALQLGQPYMKSVQKGNLSQVNEALNELYVDDEDYESLRKSIDSFN
NFNMIALASKLSTHELLEFRRISAYVYRRNKKWSQSIELSKNDRMWKDCIDTANESEDAE
IIEGLLRFFCETSEKECFCACLYTCFSHISPDVVLELGWVNGYHHFIMPFLIQNLRQTYS
RLKKLEERTAPPKEDANAQDGIAATYGNLSGFGGGMLMLENGGGMGSPMGGPGIDMSGFG
TAQQPQMGGMPNGSMPGAVPYM
NT seq
5109 nt
NT seq
+upstream
nt +downstream
nt
atggcggcaactcctattacctttacggaggccttgaacctgcaacaactcggagttccc
gaggcagcgatcaagcatggaaaaacaaccatggaaagtgatcgtttcattgtggccgta
gaagaagcccaggtcaccatgattgacttgcgcaacaacgccgcggtggagcgcaaggcc
atgaaggcggaagccgcgattatgaacccgggagaacaacggatcttggcgctgcgctcg
ggagtcaacgttcaaatctttaacctcgacacccgacaaaagctcaagtcccaccagctc
accgagccttgtgtctactggaaatggacgtccaactccaacttggccatggtgacggct
tccgcggtctaccattggtccctcgagggagatagtgctccccagcaagtctttgatcgt
catccgtccctccaaaacgcacaaatcatcaattaccgagtctcacaggacggcaaatgg
tgtgtgcttggaggtattgctcccggtgccaacggcgtcgtgaacggtagtatgcagctc
tacaactttgaaaaaaaactctcgcagccacttcagggtcacgctgcggcctttgccgtc
ctcaagattcccggtcgcgacgatcccgcccaagtcattgtctttcacgaaaagaagcac
gacagtccggagccacccaagctgtacgtccgcgaagtcggacgcacggcggggccgccc
tacggagtccaacccgtccagattccggtccctcaagacggagccaacgactttcccgtc
agtctcgccattgtggagaaagattcgttggcctacatgatgacccgcatgggatatgtt
tacgtctttgacgccatgtctgccaagacggtcttccgcaaccgcgttacccaagaaacg
gtctttttgtcggtcgcacaggaatccaccggggccgtctttggcatcaccgtccggcgg
ggacaagtattccggttgcaggtcaacaaccaagcattaatcccctacgtcttgaacacg
ctcaacgatgaagatcttgccctcaagttggccggacggttgaacctgcccggtgccgag
aacttgcaggcccgtgcatttgagcgtttactgcagcaaggcaacgttgcggaagccgcc
cgtattgtggcaggctcgggttcggcgttgcgcacgcccgcaaccattgctcgctttcag
caaatccccgctcagcccaaccaggtcccacctctccttcaatacttttccatcctgctg
gagacgggcaccttgaacgaacaagagtcgattgaagtcgctaagccagttttgcagcag
caacgaatcccgctgatggagaagtggctcaaggaaaacaagctcacttcctcggaatcg
ctaggtgatttgatcatgccgcacgataccggcatggccttgtcggtgtacctgcgtgcg
gaatgtcacggcaaggccattcaatgctttgtgcagcgtggtgaatacgacaagattgtt
tcgtacgctagttcggttggcttccaaatggactacacgcaaatgttgaaccagctgctt
ttctccaatcccgcgggggcgctggatctcgccaagggactggctactgcggaagccttc
ttgagcagcaatcgtcttcaggagacgacggcctttttgctcgaagctctgaaagaaaac
aagcccgagcatgctttcttgcagactaagttgcttgagatcaacttgctcagtggtgct
ccgcaggttgcggacgccattatgcagcagggaatgttgacccactacgatcgcccgcac
gtgggtaagttgtgtgaacgggctcagatgtggcagcgtgccgccgagcactacaccgag
attgccgatatcaaacgtgtgtttaagaactcgcaccaaatgagccccgagtttgtggtc
gagtattttggtaagctcaaccgtgagcagtcgatcatgttgctcaaggatatgatgggc
cgcggcccgcagaacatgcaagtctgcgttgaagttgcgaagaagtatcacgaagagctg
ggatcggagcaattggtccaggtgtttgaatccaaccgcgcgacggaaggtctctactat
taccttggtgccattgtcaatagttcggaggacccctttgttcatttcaagtacatccag
gcttcgtgtatgctcggccaattcaaggaagccgaacgcgtctgtcgcgattctaccgta
tacattgcggaagaggtgaaggaatacctcaagggagctaagcttcccgatcctcgtccg
cttattcacgtgtgtgaccgccacggattcgtggacgaattgacggaatacctctacttg
aactcacttttgcaatacattgaagtatacgttaccaaggtgtctccgacgaagactcca
atggtggtcggaaaacttttcgacttgggtgctaacgaggactttatcaagcgtttattg
atggccgtcggaactgcctgtccggtggacgagctagtggaaattgccgaaacccgcaat
cgcctgcgtttgttgcagccttggctcgaggcgcgtgttgccactggaagcaccgaaccg
ggaacgcacgacgcgcttggaaagatctacattacgctcaaccgcgaccccaaggcgtat
ctgctcaacaacatgttctacaatcccaaggtcctgggaccgtactgcgaagcgttggat
ccgcagttggctttcatcgcctacaagcgtggtgccggtgagtgcgacgacgagctcatc
aaagtcagtcacgaccatgggctgtaccgggatttggcgcagtacttggttgagcgacag
gacttggtgctgtggggcaaggtgctcaacaaggaagaaggcaaagaagatgaggaagat
cctcagcgacgtcaacttatcgatcaagtcgttgaatgggctcttccagaaagcaccaat
gctgacgaagtttcctgcacagtcaaggccttcatggcagccgacttgcctagcgagctc
atcaacctgttggagcggattgtcctacagggttcggacttttccgacaacaagaacttg
cagaatttacttatccttacggccattcgtgctgatgccagccgcgtcgcggggtacgtt
gatcagctcgacaactttgacgcgaaggatattgctcttatttgtgtgtcggagagtcac
atgctctacgaagaaggtttcagtatctacaccaagttttcgaagcccgaattcacgcag
gacaaagatgaacaggtagaaatgcaggtgctagcgattggcgttgtcgttgacaacatg
aaagacttagaccgtgccaagacgtacgctacgcagtgtgacgaaaagcctgtctggtcg
aagctcggtaaggcccagctagaagggaagtttgccgcggatgctattgaatccttcatc
aatgctgatgacccgagcgaatatgtcatggtttgcgctgaagccaacgaggccgagatc
tggatggaactcattccttacctcaaaatggctcgcaaaactatgcaagagaacttggtt
gatactgagttgatttactcgtacgccaagacgaacaatctcacagagcttgagcaattt
gtcactggaccgaatgtttcgaacattcaatccatcggagatcgttgtttcaacgaaggt
ttgtaccaggcagcgaagattttgtttatcagtatcaacaacaactcgaagttggccctg
tgtcatatccatttggaagagtaccgggaagccgttgaagctgccaaaaaggccaacaat
gtatcaacatggaaggctgtatgctttgcctgtttgagagctgatgagttccgactggct
gctacatgtggtctcgaagttattaagtatcccgaccacttagacgaggttgtcacccac
tactccgatctcggtcacttcgatcatttgatttctttgtttgagcaaggaattggtttg
gaagatgctcacattggcatcttcaccgaacttggcattttgtacacgaagcatattccg
gagaaggtcatggatcattgcaaggtcttctttaccaaactcaacgtatcgaaggtagtc
cgcgcttgtgagcgagcccgtatgtacaagcctgctgtgtatctgtacatgcaagataag
cagcacgataacgctatcaagaccatgattgaacgtgcccctgcgtgggaaaacgatctc
tttttggatgcggtcaccaagatccgcaatgccgaactcacgtacaaggctatcgcctat
tacttgtcgatgcatcctaatctctttacccgactgatggaagttatggaggataccgcc
gatcactctcgtgtagtgagtcagttgcgacgcacaggcgattgggctttacagcttggt
caaccgtacatgaaatctgttcagaagggtaacctgagccaggtgaacgaggccctgaat
gagctctacgtggatgatgaggactacgaatcccttcgcaagtcgatcgatagtttcaac
aatttcaacatgattgcactagcgtcaaagctctccactcatgagcttcttgagttccga
cgtatatctgcttacgtttaccgtcgcaataagaagtggagccagtcaattgaactttcg
aagaatgaccgcatgtggaaggactgcatcgataccgccaatgagtcggaagatgctgaa
atcattgaaggtctgctgcgttttttctgcgaaacatccgagaaggagtgtttctgtgca
tgcctgtacacgtgcttttctcatatttcccccgatgtggtgttggaattgggatgggtc
aacggttatcaccactttatcatgcctttcctcattcaaaaccttcgccagacgtacagt
cgtctcaagaagttggaagagcgaactgctccaccgaaggaagacgcgaatgcgcaggat
ggcattgcagcgacttacggaaacctgagtggatttggaggtggcatgctcatgttggag
aatggtggtggaatgggatctccgatgggcggaccaggaatcgatatgagtggattcggt
acggcgcaacagccacagatgggtgggatgcccaacggaagtatgcctggcgctgtgccc
tacatgtag
DBGET
integrated database retrieval system
