Phaeodactylum tricornutum: PHATRDRAFT_55037
Help
Entry
PHATRDRAFT_55037 CDS
T01075
Symbol
SKP3
Name
(RefSeq) sensor kinase protein 3
Organism
pti
Phaeodactylum tricornutum
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS
PAS_4
PAS_9
PAS_3
HATPase_c
PAS_8
PAS_10
HisKA
Response_reg
HATPase_c_2
Motif
Other DBs
NCBI-GeneID:
7195765
NCBI-ProteinID:
XP_002184053
JGI:
55037
UniProt:
B7GAD0
LinkDB
All DBs
Position
22:47255..50689
Genome browser
AA seq
1017 aa
AA seq
DB search
MAPNHGIQHCLVMTSVDEQAQHGLALERIGIESSVFDSIASPIFAVDRLGNVTDWNETLA
DLSGFASLDVVRRPAELMLDGCVDTWREALQTVQRAKRSFRCMLRLHSNQSVSTSTWYAA
RISRYNSYEGILIGAVCMLDEETQTFDMGKHIHVQDLRPNDTKGYEPIPDCDSRELLGGT
NILIIKMDKHGRVDLWNKVSTEITGVTERDARGENISVFLTESSRKAFSDVMDKALSGEA
CANYQLEFLTKDGCIRYLLGSVTPRTDLDGSIAGCLVIAQDVTETAIRERTVTATALELR
ILIDTANVAIFGVDCDGYINEWNDTMANTCGFTGDEAFHKSFVHTFIAQDLRPAFEVVLE
IALQGKFTKNYEAEILTKLGEIRYLLLNTTARRNSENEIIGVVLIAQDVTEEYKHDRAVA
AMASELRQLIDTANAPIFGIDCEGDVNEWNDKTSEITGYTKEEAFDCCLVETFIVPSMQE
SVRHVLETALKGRGTSNYDLEFRTKSNEIRHLLVNATTRRDAENNIVGVVGVAQDVTEAV
QRDRAVAGMALELRQLIDTANAPIFGIDINGNVNEWNRRTQEITGYSKEETFDEPLVERF
IAKHIRKKVQEILDSALQGIETSNYELEFLSKSGEPAFMLVNATTRRDPEFNVVGVVGVA
QDVTEDRKHAEELRKMQYLQALQEAKVETERNMTAYFAHELRNPLGAIDSALSVMPENIP
DSAKSLVSGMQLCCSFMSSIMNNLLDVRKMEEGKMTLNKTPISLKALSRKVHKMLGPSVK
PGVTFTESCTTNGKDWVLGDEHRLQQVMTNVITNAIKYTVGGSISIYMGWEGDDVKFECV
DTGPGIPKREQEKLFQRFVMRGGAPGTGLGLAIAKHLVDLAGGSIRFDSDPSIQAGTACI
VLLPLALCDPPEEGNNVIKMSLLDEPLKFLVIDDVRMNRTMLKRRLQTGIAPNCVLTEAS
TGEEALQIVGKQTFDVIIVDQYMEEAGGVMVGTDVVYAMRRMKTGFGKSQFQQTPLS
NT seq
3054 nt
NT seq
+upstream
nt +downstream
nt
atggctccgaatcacggcattcaacattgcctcgtcatgacatcagtggatgagcaggcg
cagcatggcttggcattagaaagaattgggatcgagtcctcggtgtttgactctattgct
tcaccaatctttgccgtcgatcgccttgggaacgtcaccgactggaacgaaacactagca
gatttgtctggttttgcatccctcgatgtggtacgacgaccggcagagttgatgttagac
ggttgcgtagacacttggcgcgaggccttacagacagtgcaaagagcgaaacgtagtttt
cgatgcatgttgcgtctgcatagcaaccaatcagtatcgacttcaacatggtatgctgcg
aggatctcccgttacaattcttacgaagggatattaattggggctgtatgtatgctagat
gaagaaactcaaacattcgacatgggtaagcatatccatgttcaagatctgcgtccaaac
gatactaaaggatacgaaccaataccagattgcgattctcgggaacttcttggcggcaca
aacatcctgatcatcaaaatggataagcatggaagggttgatctttggaacaaggtttct
acagagataactggtgtcacggaacgcgacgcccgcggcgagaatatttctgtattccta
accgagtcgtctcgaaaagcgtttagtgatgttatggataaggcattgtcaggtgaagca
tgcgcgaactaccaactagagtttttgacaaaagatggttgcattcgatacctactagga
agcgtcacaccgcgcactgatcttgacggcagcattgcgggctgcttggttatcgcacaa
gatgtaacggagacggccatacgcgaaaggacggtcacagcaactgctcttgaactgaga
atcctaattgatacagcgaacgtagcaatatttggagtcgactgtgacggttacatcaat
gaatggaatgacacgatggctaacacatgtggtttcactggtgatgaggcgttccataag
tcatttgtccataccttcattgcccaggatctgagacctgcctttgaagttgtattggag
attgccttacaagggaaatttaccaaaaattacgaggcggaaattttaacaaagcttggc
gagatacggtatctattattgaataccactgctcggagaaactctgaaaacgaaattatt
ggagttgtattgattgctcaagatgtgaccgaggaatacaaacatgaccgtgcagttgct
gctatggccagtgagctccggcagctaattgacactgccaacgccccgattttcggcatt
gattgtgaaggggacgtgaacgaatggaatgacaaaacatcagagattactggatacacg
aaagaggaggcctttgattgctgtctagtggaaacctttatcgttccatcaatgcaggag
tccgtgagacacgtcctggagacagctctaaaaggaagaggaacatctaactatgacctc
gagtttcgtacgaaatccaacgagattcgccatcttcttgtaaacgcaaccactagacgt
gatgctgagaacaatattgtgggagtagttggtgttgcacaagatgtcactgaagctgtc
caacgcgaccgggctgtagctggtatggctttggagcttcgacaactaatcgacacggcc
aatgccccgattttcgggattgacataaatgggaatgtaaacgagtggaatcggagaact
caagagataacaggttactcgaaagaagagacattcgatgagcccctagtagaacggttt
atcgccaagcacatcaggaagaaggttcaagaaattctggactcggcgttgcaaggaatt
gagacttcaaattacgaactcgaatttttgtcgaagtccggagagccagcttttatgctt
gtaaacgcaactactcgacgagatcccgagtttaatgttgtcggtgttgttggggtagcc
caggatgttaccgaagacaggaaacacgcagaggaactacgaaagatgcagtatttgcaa
gcgctgcaagaagcaaaagtggaaaccgagcgtaacatgactgcctattttgcgcacgag
ctaagaaatccacttggagcgattgacagtgcgctgagtgtgatgcctgaaaacattcct
gattcggcaaagtcactagtctcagggatgcaactttgctgcagtttcatgtcatcaatt
atgaacaacctgctcgacgtccgcaaaatggaagagggtaaaatgactctgaacaagacc
cccatctcattgaaagctctctctagaaaagtacacaaaatgcttggaccctctgttaaa
cctggagtaacatttacagaaagttgtacaaccaacggaaaagattgggttttaggagat
gaacatcgcttacaacaggtgatgacgaacgttatcacgaatgcgattaaatacactgtc
ggaggatcaatttcaatatacatggggtgggaaggagacgatgtgaagttcgagtgtgtg
gatacaggacccggcattccgaaacgagaacaagagaagctttttcagcgattcgtaatg
agaggaggggcaccagggactggactaggacttgcaattgcaaagcatctcgtggatctt
gcgggcggatccatccggtttgatagtgatccgtcaatacaggctggtactgcatgcatc
gttttgcttccgcttgcactatgtgatcctccagaagaaggaaacaatgtcatcaaaatg
agtttgctagatgagcccttaaaatttctggtcatcgatgatgtgagaatgaatcgtaca
atgttgaaacgccgcctccaaacaggaattgcaccaaattgcgtcttgacagaagcgagt
acgggggaagaagccttacaaatagttggcaagcagacgtttgacgtgattattgtggac
cagtacatggaagaagccggaggtgttatggtcggaaccgatgttgtttatgcgatgcga
cgtatgaaaactgggtttggcaaaagccaattccaacaaacgccactatcataa
DBGET
integrated database retrieval system