KEGG   Phaeodactylum tricornutum: PHATRDRAFT_8451
Entry
PHATRDRAFT_8451   CDS       T01075                                 
Name
(RefSeq) hypothetical protein
  KO
K14407  cleavage stimulation factor subunit 2
Organism
pti  Phaeodactylum tricornutum
Pathway
pti03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:pti00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    PHATRDRAFT_8451
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pti03019]
    PHATRDRAFT_8451
Messenger RNA biogenesis [BR:pti03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage stimulation factor (CSTF) complex
     PHATRDRAFT_8451
    U7-dependent histone pre-mRNA processing factors
     PHATRDRAFT_8451
SSDB
Motif
Pfam: RRM_1 RRM_occluded RRM_10 RRM_5 DUF1866 RRM_7 RRM_MARF1 VWA RRM_PARP14_3 RRM_3 rSAM_target_put RRM_YTH1 RRM_RdRP1_2 RRM_8
Other DBs
NCBI-GeneID: 7197192
NCBI-ProteinID: XP_002177653
JGI: 8451
UniProt: B7FSF3
LinkDB
Position
2:<636419..>636646
AA seq 76 aa
VFVGNLAFNTTEEQLQQVFSDIGRVIHVRLVTDVDTGKPRGFAFVEFSDAQAALSAIRNM
NDYELNGRRIRVNFSN
NT seq 228 nt   +upstreamnt  +downstreamnt
gtctttgtgggaaatctggccttcaacaccaccgaagaacaactgcagcaagtattttcc
gacattggccgcgtcattcacgtgcggctggtaaccgacgtggatacgggcaaaccccgg
ggattcgcctttgtggagttctccgacgcgcaagcggcgttgtccgccattcgcaacatg
aacgattacgaacttaatggccgacgcattcgcgtcaattttagcaat

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