Phaeodactylum tricornutum: PHATRDRAFT_8451
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Entry
PHATRDRAFT_8451 CDS
T01075
Name
(RefSeq) hypothetical protein
KO
K14407
cleavage stimulation factor subunit 2
Organism
pti
Phaeodactylum tricornutum
Pathway
pti03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pti00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
PHATRDRAFT_8451
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pti03019
]
PHATRDRAFT_8451
Messenger RNA biogenesis [BR:
pti03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
PHATRDRAFT_8451
U7-dependent histone pre-mRNA processing factors
PHATRDRAFT_8451
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_10
RRM_5
DUF1866
RRM_7
RRM_MARF1
VWA
RRM_PARP14_3
RRM_3
rSAM_target_put
RRM_YTH1
RRM_RdRP1_2
RRM_8
Motif
Other DBs
NCBI-GeneID:
7197192
NCBI-ProteinID:
XP_002177653
JGI:
8451
UniProt:
B7FSF3
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Position
2:<636419..>636646
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AA seq
76 aa
AA seq
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VFVGNLAFNTTEEQLQQVFSDIGRVIHVRLVTDVDTGKPRGFAFVEFSDAQAALSAIRNM
NDYELNGRRIRVNFSN
NT seq
228 nt
NT seq
+upstream
nt +downstream
nt
gtctttgtgggaaatctggccttcaacaccaccgaagaacaactgcagcaagtattttcc
gacattggccgcgtcattcacgtgcggctggtaaccgacgtggatacgggcaaaccccgg
ggattcgcctttgtggagttctccgacgcgcaagcggcgttgtccgccattcgcaacatg
aacgattacgaacttaatggccgacgcattcgcgtcaattttagcaat
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