Phaeodactylum tricornutum: PHATRDRAFT_9070
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Entry
PHATRDRAFT_9070 CDS
T01075
Name
(RefSeq) hypothetical protein
KO
K09567
peptidyl-prolyl isomerase H (cyclophilin H) [EC:
5.2.1.8
]
Organism
pti
Phaeodactylum tricornutum
Pathway
pti03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pti00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PHATRDRAFT_9070
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pti03041
]
PHATRDRAFT_9070
03110 Chaperones and folding catalysts [BR:
pti03110
]
PHATRDRAFT_9070
Enzymes [BR:
pti01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
PHATRDRAFT_9070
Spliceosome [BR:
pti03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
PHATRDRAFT_9070
Chaperones and folding catalysts [BR:
pti03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
PHATRDRAFT_9070
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pro_isomerase
YkuD
Motif
Other DBs
NCBI-GeneID:
7196512
NCBI-ProteinID:
XP_002176768
JGI:
9070
UniProt:
B7FPU1
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All DBs
Position
1:1351774..1352430
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AA seq
192 aa
AA seq
DB search
MASTSPDPTVMEAIERGNVVVFFDVSLGESGDNETPLGRIKIELFQQDCPKTCENFRQFC
TGEFLQNEQPTGYKNSIFHRVIKGFMIQGGDFVNHDGSGKMSIYGATSFPDENFLHKHDR
PGLLSSANSGPNTNGCQFFITCGKADWLDGKHVVFGQVLDADSMLTVRKCEAAPVNGSEP
RLPIRIVQCGEL
NT seq
579 nt
NT seq
+upstream
nt +downstream
nt
atggcatcgacgagtccagatccgacagtgatggaagctatcgaaaggggaaatgtcgtc
gtctttttcgatgtgtctttgggggagtcaggcgacaacgagacgccgttgggacggatc
aaaatcgaactttttcaacaggattgtccgaaaacatgcgagaactttcgacagttttgc
accggagaattcttgcagaacgaacaacctaccggctacaagaacagtatctttcatcgc
gtcattaaaggcttcatgattcaaggtggagactttgtcaatcacgacggctcgggaaaa
atgagcatatacggcgcaacctccttcccggacgaaaactttctgcacaagcatgatcga
cccggccttctatcaagcgccaacagtggaccgaacacaaacggatgtcaattttttatc
acctgtggtaaagccgactggcttgacggtaaacacgtggtatttggtcaggttttggat
gcagacagcatgttgacggtacgaaagtgtgaagcggctccagtgaatgggagcgagccg
cgtttaccaatccgcattgtgcaatgtggagagctatag
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